PPA24468 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA24468 T305925_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.784 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA24468 Nuclear receptor 115 186

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.992
PPA24481 Pristionchus pacificus PPA24481 I 0.931
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.931
LOAG_16377 Loa loa LOAG_16377 I 0.920
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.920
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.918
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.905
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.898
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.895
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.895
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.895
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.894
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.894
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.894
CBG09380 Caenorhabditis briggsae CBG09380 I 0.891
CJA00680 Caenorhabditis japonica CJA00680 I 0.885
NECAME_08394 Necator americanus NECAME_08394 I 0.885
CBN15481 Caenorhabditis brenneri CBN15481 I 0.884
CBN28528 Caenorhabditis brenneri CBN28528 I 0.884
CRE30787 Caenorhabditis remanei CRE30787 I 0.884
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.884
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.884
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.884
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.884
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.882
CBN24827 Caenorhabditis brenneri CBN24827 I 0.878
ASU_03657 Ascaris suum ASU_03657 I 0.876
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.876
ASU_10584 Ascaris suum ASU_10584 I 0.875
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.875
L889_g22901 Steinernema feltiae L889_g22901 I 0.875
L892_g5079 Steinernema scapterisci L892_g5079 I 0.875
L893_g15276 Steinernema glaseri L893_g15276 I 0.875
L898_g8573 Steinernema monticolum L898_g8573 I 0.875
CBG10857 Caenorhabditis briggsae CBG10857 I 0.874
CRE00606 Caenorhabditis remanei CRE00606 I 0.874
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.874
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.874
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.873
L893_g28857 Steinernema glaseri L893_g28857 I 0.872
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.870
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.869
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.868
CBG10855 Caenorhabditis briggsae CBG10855 I 0.867
CJA08896 Caenorhabditis japonica CJA08896 I 0.867
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.867
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.866
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.864
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.862
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.861
CRE00149 Caenorhabditis remanei CRE00149 I 0.859
L892_g4169 Steinernema scapterisci L892_g4169 I 0.858
L889_g1557 Steinernema feltiae L889_g1557 I 0.856
L898_g9866 Steinernema monticolum L898_g9866 I 0.856
L889_g1891 Steinernema feltiae L889_g1891 I 0.849
PPA21777 Pristionchus pacificus PPA21777 I 0.848
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.848
PPA29597 Pristionchus pacificus PPA29597 I 0.842
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.840
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.833
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.833
PPA27011 Pristionchus pacificus PPA27011 N 0.828
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.826
L893_g3565 Steinernema glaseri L893_g3565 I 0.825
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.825
L892_g17612 Steinernema scapterisci L892_g17612 I 0.824
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.820
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.820
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.820
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.818
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.818
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.811
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.811
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.809
L893_g25227 Steinernema glaseri L893_g25227 I 0.809
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.809
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.809
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.808
ASU_12501 Ascaris suum ASU_12501 I 0.808
NECAME_00872 Necator americanus NECAME_00872 I 0.808
CBN29725 Caenorhabditis brenneri CBN29725 I 0.806
CRE27053 Caenorhabditis remanei CRE27053 I 0.806
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.801
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.800
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.800
NECAME_01944 Necator americanus NECAME_01944 I 0.800
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.798
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.795
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.795
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.787
L889_g7780 Steinernema feltiae L889_g7780 I 0.787
L892_g8671 Steinernema scapterisci L892_g8671 I 0.787
CBG01866 Caenorhabditis briggsae CBG01866 I 0.784
CBN19235 Caenorhabditis brenneri CBN19235 I 0.784
CJA13458 Caenorhabditis japonica CJA13458 I 0.784
CRE03310 Caenorhabditis remanei CRE03310 I 0.784
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.784
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.784
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.784
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.784
CRE25378 Caenorhabditis remanei CRE25378 I 0.783
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.783
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.781
L898_g22454 Steinernema monticolum L898_g22454 I 0.781
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.781
CBG16594 Caenorhabditis briggsae CBG16594 I 0.780
CBN20518 Caenorhabditis brenneri CBN20518 I 0.780
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.780
L889_g29879 Steinernema feltiae L889_g29879 I 0.780
L893_g3010 Steinernema glaseri L893_g3010 I 0.780
L898_g2764 Steinernema monticolum L898_g2764 I 0.780
Bm5319 Brugia malayi Bm5319 I 0.777
LOAG_00300 Loa loa LOAG_00300 I 0.777
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.777
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.777
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.777
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.777
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.777
PPA06637 Pristionchus pacificus PPA06637 I 0.773
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.770
nhr-137 Caenorhabditis elegans WBGene00003727 N 0.768
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.766
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.765
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.765
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.765
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.763
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.763
PPA10975 Pristionchus pacificus PPA10975 N 0.760
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.758
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.758
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.750
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.745