CRE00149 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE00149 T302034_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.919 0.571
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.888 0.571
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.845 0.600
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.844 0.600
nhr-204
M00704_2.00 		Caenorhabditis elegans
NDNTGRTMHN
NDKAYCANHN		 PBM
Narasimhan et al.(2015)
pTH10028 		0.784 0.471
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.764 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE00149 Nuclear receptor 89 158

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG10855 Caenorhabditis briggsae CBG10855 I 0.994
CJA08896 Caenorhabditis japonica CJA08896 I 0.994
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.994
CBN24827 Caenorhabditis brenneri CBN24827 I 0.993
L893_g3565 Steinernema glaseri L893_g3565 I 0.992
L892_g17612 Steinernema scapterisci L892_g17612 I 0.991
L892_g4169 Steinernema scapterisci L892_g4169 I 0.989
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.989
NECAME_08394 Necator americanus NECAME_08394 I 0.988
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.987
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.987
PPA21777 Pristionchus pacificus PPA21777 I 0.986
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.986
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.986
L893_g28857 Steinernema glaseri L893_g28857 I 0.986
L889_g1557 Steinernema feltiae L889_g1557 I 0.984
L889_g1891 Steinernema feltiae L889_g1891 I 0.984
L898_g9866 Steinernema monticolum L898_g9866 I 0.984
ASU_03657 Ascaris suum ASU_03657 I 0.980
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.980
CBG10857 Caenorhabditis briggsae CBG10857 I 0.977
CRE00606 Caenorhabditis remanei CRE00606 I 0.977
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.977
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.975
LOAG_16377 Loa loa LOAG_16377 I 0.973
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.973
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.973
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.972
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.972
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.972
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.972
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.971
CJA00680 Caenorhabditis japonica CJA00680 I 0.969
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.969
PPA24481 Pristionchus pacificus PPA24481 I 0.951
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.951
PPA29597 Pristionchus pacificus PPA29597 I 0.949
NECAME_01944 Necator americanus NECAME_01944 I 0.948
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.947
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.946
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.945
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.944
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.943
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.942
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.941
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.941
L889_g17247 Steinernema feltiae L889_g17247 I 0.941
L898_g26357 Steinernema monticolum L898_g26357 I 0.941
L893_g13285 Steinernema glaseri L893_g13285 I 0.940
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.940
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.938
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.927
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.927
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.926
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.926
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.926
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.926
PPA06637 Pristionchus pacificus PPA06637 I 0.925
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.924
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.924
Bm4980 Brugia malayi Bm4980 I 0.922
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.922
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.921
LOAG_08615 Loa loa LOAG_08615 I 0.920
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.920
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.920
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.920
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.920
CBG03844 Caenorhabditis briggsae CBG03844 I 0.919
CBN18198 Caenorhabditis brenneri CBN18198 I 0.919
CBN20749 Caenorhabditis brenneri CBN20749 I 0.919
CRE08259 Caenorhabditis remanei CRE08259 I 0.919
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.919
ASU_03870 Ascaris suum ASU_03870 I 0.919
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.919
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.917
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.917
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.917
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.917
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.917
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.916
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.916
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.916
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.916
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.913
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.913
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.913
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.911
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.909
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.909
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.909
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.909
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.907
PPA10975 Pristionchus pacificus PPA10975 N 0.903
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.901
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.894
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.892
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.891
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.891
CBG01866 Caenorhabditis briggsae CBG01866 I 0.888
CBN19235 Caenorhabditis brenneri CBN19235 I 0.888
CJA13458 Caenorhabditis japonica CJA13458 I 0.888
CRE03310 Caenorhabditis remanei CRE03310 I 0.888
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.888
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.888
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.888
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.888
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.887
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.887
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.887
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.887
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.885
L889_g29879 Steinernema feltiae L889_g29879 I 0.885
L893_g3010 Steinernema glaseri L893_g3010 I 0.885
L898_g2764 Steinernema monticolum L898_g2764 I 0.885
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.884
L889_g7780 Steinernema feltiae L889_g7780 I 0.884
L892_g8671 Steinernema scapterisci L892_g8671 I 0.884
L898_g22454 Steinernema monticolum L898_g22454 I 0.884
Bm5319 Brugia malayi Bm5319 I 0.883
LOAG_00300 Loa loa LOAG_00300 I 0.883
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.883
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.883
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.883
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.883
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.883
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.883
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.883
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.883
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.882
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.880
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.880
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.874
Hba_12764 Heterorhabditis bacteriophora Hba_12764 N 0.869
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.869
L893_g25227 Steinernema glaseri L893_g25227 I 0.869
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.869
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.869
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.869
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.868
ASU_12501 Ascaris suum ASU_12501 I 0.868
NECAME_00872 Necator americanus NECAME_00872 I 0.868
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.867
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.867
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.862
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.862
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.860
PPA24468 Pristionchus pacificus PPA24468 I 0.859
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.859
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.856
CBG09380 Caenorhabditis briggsae CBG09380 I 0.855
CRE25378 Caenorhabditis remanei CRE25378 I 0.849
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.848
CBG16594 Caenorhabditis briggsae CBG16594 I 0.847
CBN20518 Caenorhabditis brenneri CBN20518 I 0.847
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.845
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.845
CBG23380 Caenorhabditis briggsae CBG23380 D 0.844
CBN28497 Caenorhabditis brenneri CBN28497 I 0.844
CRE27050 Caenorhabditis remanei CRE27050 I 0.844
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.838
CBN29725 Caenorhabditis brenneri CBN29725 I 0.835
CRE27053 Caenorhabditis remanei CRE27053 I 0.835
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.833
ASU_10584 Ascaris suum ASU_10584 I 0.832
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.832
L889_g22901 Steinernema feltiae L889_g22901 I 0.832
L892_g5079 Steinernema scapterisci L892_g5079 I 0.832
L893_g15276 Steinernema glaseri L893_g15276 I 0.832
L898_g8573 Steinernema monticolum L898_g8573 I 0.832
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.832
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.828
ANCCEY_01235 Ancylostoma ceylanicum ANCCEY_01235 N 0.823
ALUE_0001920701 Ascaris lumbricoides ALUE_0001920701 N 0.819
CBG23381 Caenorhabditis briggsae CBG23381 I 0.814
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.807
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.806
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.801
CBN28791 Caenorhabditis brenneri CBN28791 I 0.800
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.799
ASU_13587 Ascaris suum ASU_13587 I 0.799
TELCIR_12561 Teladorsagia circumcincta TELCIR_12561 N 0.799
CBN15481 Caenorhabditis brenneri CBN15481 I 0.797
CBN28528 Caenorhabditis brenneri CBN28528 I 0.797
CRE30787 Caenorhabditis remanei CRE30787 I 0.797
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.797
CRE27052 Caenorhabditis remanei CRE27052 I 0.794
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.794
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.792
ANCCAN_20955 Ancylostoma caninum ANCCAN_20955 N 0.791
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.791
CRE26981 Caenorhabditis remanei CRE26981 I 0.787
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.787
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.787
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.786
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.786
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.786
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.786
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.786
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.785
CJA41479 Caenorhabditis japonica CJA41479 I 0.784
PPA27013 Pristionchus pacificus PPA27013 N 0.784
nhr-204 Caenorhabditis elegans WBGene00019816 D 0.784
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.783
scaffold204-EXSNAP2012.8 Pristionchus exspectatus scaffold204-EXSNAP2012.8 N 0.779
CBN19664 Caenorhabditis brenneri CBN19664 N 0.773
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.771
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.771
CBN23409 Caenorhabditis brenneri CBN23409 I 0.768
CBN28056 Caenorhabditis brenneri CBN28056 I 0.768
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.765
CBG26996 Caenorhabditis briggsae CBG26996 I 0.764
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.764
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.759
L889_g11570 Steinernema feltiae L889_g11570 I 0.758
L893_g21283 Steinernema glaseri L893_g21283 I 0.758
L898_g23058 Steinernema monticolum L898_g23058 I 0.758
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.758
L892_g4134 Steinernema scapterisci L892_g4134 I 0.756
LOAG_08636 Loa loa LOAG_08636 I 0.755
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.755
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.755
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.755
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.755
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.755
ASU_02757 Ascaris suum ASU_02757 N 0.753
ASU_02770 Ascaris suum ASU_02770 I 0.753
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.753
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.753
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.748
CJA14829 Caenorhabditis japonica CJA14829 I 0.747
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.746