CJA41479 (Caenorhabditis japonica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CJA41479 T302010_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.831 0.734
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.823 0.719
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA41479b Nuclear receptor 4 72

Links

Other Nuclear receptor family TFs
Other Caenorhabditis japonica TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.831
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.831
NECAME_01944 Necator americanus NECAME_01944 I 0.831
L892_g4169 Steinernema scapterisci L892_g4169 I 0.830
L893_g28857 Steinernema glaseri L893_g28857 I 0.830
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.827
CBG23380 Caenorhabditis briggsae CBG23380 D 0.823
CBN28497 Caenorhabditis brenneri CBN28497 I 0.823
CRE27050 Caenorhabditis remanei CRE27050 I 0.823
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.822
L889_g1557 Steinernema feltiae L889_g1557 I 0.822
L898_g9866 Steinernema monticolum L898_g9866 I 0.822
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.818
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.818
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.816
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.795
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.795
ASU_02755 Ascaris suum ASU_02755 I 0.794
NECAME_08394 Necator americanus NECAME_08394 I 0.790
CBG10855 Caenorhabditis briggsae CBG10855 I 0.788
CBN24827 Caenorhabditis brenneri CBN24827 I 0.788
CJA08896 Caenorhabditis japonica CJA08896 I 0.788
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.788
CRE00149 Caenorhabditis remanei CRE00149 I 0.784
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.784
LOAG_16377 Loa loa LOAG_16377 I 0.782
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.782
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.781
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.781
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.781
PPA24481 Pristionchus pacificus PPA24481 I 0.780
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.780
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.779
PPA21777 Pristionchus pacificus PPA21777 I 0.775
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.766
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.761
ASU_03657 Ascaris suum ASU_03657 I 0.761
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.761
CRE09109 Caenorhabditis remanei CRE09109 I 0.760
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.758
L893_g3565 Steinernema glaseri L893_g3565 I 0.757
PPA29597 Pristionchus pacificus PPA29597 I 0.752
L892_g17612 Steinernema scapterisci L892_g17612 I 0.750