HCOI01292200 (Haemonchus contortus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HCOI01292200 T308793_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.937 0.586
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.899 0.629
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.885 0.614
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.882 0.600
nhr-204
M00704_2.00 		Caenorhabditis elegans
NDNTGRTMHN
NDKAYCANHN		 PBM
Narasimhan et al.(2015)
pTH10028 		0.862 0.543
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.802 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI01292200.t1 Nuclear receptor 62 131

Links

Other Nuclear receptor family TFs
Other Haemonchus contortus TFs

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.994
NECAME_08394 Necator americanus NECAME_08394 I 0.993
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.991
PPA21777 Pristionchus pacificus PPA21777 I 0.988
L889_g1557 Steinernema feltiae L889_g1557 I 0.988
L893_g28857 Steinernema glaseri L893_g28857 I 0.988
L898_g9866 Steinernema monticolum L898_g9866 I 0.988
CBG10855 Caenorhabditis briggsae CBG10855 I 0.986
CBN24827 Caenorhabditis brenneri CBN24827 I 0.986
CJA08896 Caenorhabditis japonica CJA08896 I 0.986
CRE00149 Caenorhabditis remanei CRE00149 I 0.986
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.986
L892_g17612 Steinernema scapterisci L892_g17612 I 0.986
L893_g3565 Steinernema glaseri L893_g3565 I 0.986
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.985
ASU_03657 Ascaris suum ASU_03657 I 0.984
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.984
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.984
L892_g4169 Steinernema scapterisci L892_g4169 I 0.983
L889_g1891 Steinernema feltiae L889_g1891 I 0.980
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.979
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.974
CJA00680 Caenorhabditis japonica CJA00680 I 0.972
LOAG_16377 Loa loa LOAG_16377 I 0.969
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.969
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.969
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.965
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.963
CBG10857 Caenorhabditis briggsae CBG10857 I 0.961
CRE00606 Caenorhabditis remanei CRE00606 I 0.961
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.961
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.955
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.955
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.955
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.955
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.955
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.955
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.953
PPA29597 Pristionchus pacificus PPA29597 I 0.951
PPA24481 Pristionchus pacificus PPA24481 I 0.945
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.945
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.945
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.945
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.945
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.945
Bm4980 Brugia malayi Bm4980 I 0.944
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.944
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.943
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.943
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.943
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.943
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.942
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.940
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.940
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.940
NECAME_01944 Necator americanus NECAME_01944 I 0.940
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.940
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.940
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.939
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.939
PPA06637 Pristionchus pacificus PPA06637 I 0.938
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.938
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.938
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.938
CBG03844 Caenorhabditis briggsae CBG03844 I 0.937
CBN18198 Caenorhabditis brenneri CBN18198 I 0.937
CBN20749 Caenorhabditis brenneri CBN20749 I 0.937
CRE08259 Caenorhabditis remanei CRE08259 I 0.937
LOAG_08615 Loa loa LOAG_08615 I 0.937
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.937
ASU_03870 Ascaris suum ASU_03870 I 0.937
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.937
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.937
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.937
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.934
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.934
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.933
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.933
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.930
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.930
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.930
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.930
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.930
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.929
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.929
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.927
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.918
L893_g13285 Steinernema glaseri L893_g13285 I 0.916
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.916
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.915
L889_g17247 Steinernema feltiae L889_g17247 I 0.915
L898_g26357 Steinernema monticolum L898_g26357 I 0.915
Hba_12764 Heterorhabditis bacteriophora Hba_12764 N 0.900
CBG01866 Caenorhabditis briggsae CBG01866 I 0.899
CBN19235 Caenorhabditis brenneri CBN19235 I 0.899
CJA13458 Caenorhabditis japonica CJA13458 I 0.899
CRE03310 Caenorhabditis remanei CRE03310 I 0.899
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.899
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.899
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.899
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.899
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.899
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.898
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.897
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.897
L889_g29879 Steinernema feltiae L889_g29879 I 0.897
L893_g3010 Steinernema glaseri L893_g3010 I 0.897
L898_g2764 Steinernema monticolum L898_g2764 I 0.897
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.896
Bm5319 Brugia malayi Bm5319 I 0.895
LOAG_00300 Loa loa LOAG_00300 I 0.895
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.895
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.895
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.895
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.895
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.895
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.895
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.895
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.894
ANCCEY_01235 Ancylostoma ceylanicum ANCCEY_01235 N 0.893
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.892
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.888
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.887
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.887
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.886
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.885
CBG23380 Caenorhabditis briggsae CBG23380 D 0.882
CBN28497 Caenorhabditis brenneri CBN28497 I 0.882
CRE27050 Caenorhabditis remanei CRE27050 I 0.882
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.881
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.880
PPA10975 Pristionchus pacificus PPA10975 N 0.879
L898_g22454 Steinernema monticolum L898_g22454 I 0.879
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.878
TELCIR_12561 Teladorsagia circumcincta TELCIR_12561 N 0.873
PPA24468 Pristionchus pacificus PPA24468 I 0.870
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.870
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.868
L889_g7780 Steinernema feltiae L889_g7780 I 0.868
L892_g8671 Steinernema scapterisci L892_g8671 I 0.868
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.866
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.865
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.865
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.865
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.865
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.864
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.864
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.864
L893_g25227 Steinernema glaseri L893_g25227 I 0.864
CBG09380 Caenorhabditis briggsae CBG09380 I 0.863
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.863
ASU_12501 Ascaris suum ASU_12501 I 0.863
NECAME_00872 Necator americanus NECAME_00872 I 0.863
nhr-204 Caenorhabditis elegans WBGene00019816 D 0.862
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.861
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.861
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.861
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.859
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.857
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.855
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.854
ANCCAN_20955 Ancylostoma caninum ANCCAN_20955 N 0.845
CRE25378 Caenorhabditis remanei CRE25378 I 0.844
CBG16594 Caenorhabditis briggsae CBG16594 I 0.841
CBN20518 Caenorhabditis brenneri CBN20518 I 0.841
ASU_10584 Ascaris suum ASU_10584 I 0.841
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.841
L889_g22901 Steinernema feltiae L889_g22901 I 0.841
L892_g5079 Steinernema scapterisci L892_g5079 I 0.841
L893_g15276 Steinernema glaseri L893_g15276 I 0.841
L898_g8573 Steinernema monticolum L898_g8573 I 0.841
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.835
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.830
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.827
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.827
CBN29725 Caenorhabditis brenneri CBN29725 I 0.826
CRE27053 Caenorhabditis remanei CRE27053 I 0.826
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.825
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.821
CJA41479 Caenorhabditis japonica CJA41479 I 0.818
ASU_13587 Ascaris suum ASU_13587 I 0.818
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.817
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.817
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.816
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.808
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.808
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.808
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.807
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.807
CRE30787 Caenorhabditis remanei CRE30787 I 0.806
CBN15481 Caenorhabditis brenneri CBN15481 I 0.805
CBN28528 Caenorhabditis brenneri CBN28528 I 0.805
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.805
CJA14829 Caenorhabditis japonica CJA14829 I 0.804
CBG23381 Caenorhabditis briggsae CBG23381 I 0.803
CBG26996 Caenorhabditis briggsae CBG26996 I 0.802
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.802
CBN23409 Caenorhabditis brenneri CBN23409 I 0.801
CBN28056 Caenorhabditis brenneri CBN28056 I 0.801
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.801
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.801
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.801
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.800
scaffold178-EXSNAP2012.20 Pristionchus exspectatus scaffold178-EXSNAP2012.20 N 0.798
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.796
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.790
CBN28791 Caenorhabditis brenneri CBN28791 I 0.789
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.789
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.789
CRE27052 Caenorhabditis remanei CRE27052 I 0.783
CRE26981 Caenorhabditis remanei CRE26981 I 0.782
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.781
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.778
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.778
Minc13747 Meloidogyne incognita Minc13747 I 0.772
Minc17538 Meloidogyne incognita Minc17538 I 0.772
ASU_02757 Ascaris suum ASU_02757 N 0.772
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.772
scaffold204-EXSNAP2012.8 Pristionchus exspectatus scaffold204-EXSNAP2012.8 N 0.770
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.770
LOAG_08636 Loa loa LOAG_08636 I 0.768
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.768
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.768
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.768
ALUE_0001217501 Ascaris lumbricoides ALUE_0001217501 N 0.766
PPA27013 Pristionchus pacificus PPA27013 N 0.764
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.763
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.759
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.759
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.759
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.759
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.759
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.752
L889_g11570 Steinernema feltiae L889_g11570 I 0.751
L893_g21283 Steinernema glaseri L893_g21283 I 0.751
L898_g23058 Steinernema monticolum L898_g23058 I 0.751
PPA20196 Pristionchus pacificus PPA20196 I 0.749
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.749
L892_g4134 Steinernema scapterisci L892_g4134 I 0.748
ASU_02770 Ascaris suum ASU_02770 I 0.747
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.747
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.747
CBG23318 Caenorhabditis briggsae CBG23318 I 0.746
CRE26982 Caenorhabditis remanei CRE26982 I 0.746
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.746
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.746