CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCLT_0000612301
(
Thelazia callipaeda
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
TCLT_0000612301
T310771_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.913
0.586
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.823
0.500
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TCLT_0000612301-mRNA-1
Nuclear receptor
24
93
LLCVVCGDQATGRHYGTIACNGCKGFFRRTIRRSYKYVCRFNGTCNIDKHNRAVCRACRYTRCINTGMKV
Links
Other
Nuclear receptor
family TFs
Other
Thelazia callipaeda
TFs
227 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_13587
Ascaris suum
ASU_13587
I
0.992
DME_0000747901
Dracunculus medinensis
DME_0000747901
I
0.991
nLs.2.1.2.g04051
Litomosoides sigmodontis
nLs.2.1.2.g04051
I
0.991
LOAG_08636
Loa loa
LOAG_08636
I
0.990
WBGene00240560
Onchocerca volvulus
WBGene00240560
I
0.990
EEL_0000204901
Elaeophora elaphi
EEL_0000204901
I
0.990
nAv.1.0.1.g09196
Acanthocheilonema viteae
nAv.1.0.1.g09196
I
0.990
nDi.2.2.2.g09348
Dirofilaria immitis
nDi.2.2.2.g09348
I
0.990
nOo.2.0.1.g03859
Onchocerca ochengi
nOo.2.0.1.g03859
I
0.990
BXY_1375200
Bursaphelenchus xylophilus
BXY_1375200
I
0.987
Minc13747
Meloidogyne incognita
Minc13747
I
0.985
Minc17538
Meloidogyne incognita
Minc17538
I
0.985
MhA1_Contig817.frz3.gene1
Meloidogyne hapla
MhA1_Contig817.frz3.gene1
I
0.985
GPLIN_000284100
Globodera pallida
GPLIN_000284100
I
0.984
PPA22443
Pristionchus pacificus
PPA22443
I
0.980
L596_g23123
Steinernema carpocapsae
L596_g23123
I
0.980
L889_g11570
Steinernema feltiae
L889_g11570
I
0.980
L892_g4134
Steinernema scapterisci
L892_g4134
I
0.980
L893_g21283
Steinernema glaseri
L893_g21283
I
0.980
L898_g23058
Steinernema monticolum
L898_g23058
I
0.980
scaffold107-EXSNAP2012.33
Pristionchus exspectatus
scaffold107-EXSNAP2012.33
I
0.980
HCOI00592600
Haemonchus contortus
HCOI00592600
I
0.978
OESDEN_04341
Oesophagostomum dentatum
OESDEN_04341
I
0.973
CBN11572
Caenorhabditis brenneri
CBN11572
I
0.964
nhr-35
Caenorhabditis elegans
WBGene00003628
I
0.964
CBG14485
Caenorhabditis briggsae
CBG14485
I
0.962
CJA16040
Caenorhabditis japonica
CJA16040
I
0.962
CRE00809
Caenorhabditis remanei
CRE00809
I
0.962
ACAC_0000711701
Angiostrongylus cantonensis
ACAC_0000711701
I
0.921
DICVIV_00957
Dictyocaulus viviparus
DICVIV_00957
I
0.921
HCOI00618700
Haemonchus contortus
HCOI00618700
I
0.921
TCLT_0000461101
Thelazia callipaeda
TCLT_0000461101
I
0.914
CBG03844
Caenorhabditis briggsae
CBG03844
I
0.913
CBN18198
Caenorhabditis brenneri
CBN18198
I
0.913
CBN20749
Caenorhabditis brenneri
CBN20749
I
0.913
CRE08259
Caenorhabditis remanei
CRE08259
I
0.913
LOAG_08615
Loa loa
LOAG_08615
I
0.913
nhr-49
Caenorhabditis elegans
WBGene00003639
D
0.913
ASU_03870
Ascaris suum
ASU_03870
I
0.913
GPLIN_001175700
Globodera pallida
GPLIN_001175700
I
0.913
PEQ_0000391501
Parascaris equorum
PEQ_0000391501
I
0.913
RSKR_0001067400
Rhabditophanes kr3021
RSKR_0001067400
I
0.913
scaffold605-EXSNAP2012.9
Pristionchus exspectatus
scaffold605-EXSNAP2012.9
I
0.913
WBGene00236987
Onchocerca volvulus
WBGene00236987
I
0.909
nOo.2.0.1.g02345
Onchocerca ochengi
nOo.2.0.1.g02345
I
0.909
BXY_1057600
Bursaphelenchus xylophilus
BXY_1057600
I
0.908
DME_0000591901
Dracunculus medinensis
DME_0000591901
I
0.907
SPAL_0000841700
Strongyloides papillosus
SPAL_0000841700
I
0.906
SVE_1799100
Strongyloides venezuelensis
SVE_1799100
I
0.906
L596_g11035
Steinernema carpocapsae
L596_g11035
I
0.905
L889_g17247
Steinernema feltiae
L889_g17247
I
0.905
L893_g13285
Steinernema glaseri
L893_g13285
I
0.905
L898_g26357
Steinernema monticolum
L898_g26357
I
0.905
PTRK_0000720500
Parastrongyloides trichosuri
PTRK_0000720500
I
0.904
PTRK_0001020800
Parastrongyloides trichosuri
PTRK_0001020800
I
0.904
SPAL_0001099500
Strongyloides papillosus
SPAL_0001099500
I
0.904
SSTP_0000145700
Strongyloides stercoralis
SSTP_0000145700
I
0.904
SSTP_0000769100
Strongyloides stercoralis
SSTP_0000769100
I
0.904
SVE_0858700
Strongyloides venezuelensis
SVE_0858700
I
0.904
Bm4980
Brugia malayi
Bm4980
I
0.903
BTMF_0000217201
Brugia timori
BTMF_0000217201
I
0.903
WUBG_17449
Wuchereria bancrofti
WUBG_17449
N
0.902
ASIM_0001848201
Anisakis simplex
ASIM_0001848201
N
0.898
SPAL_0001637600
Strongyloides papillosus
SPAL_0001637600
I
0.888
SSTP_0000055100
Strongyloides stercoralis
SSTP_0000055100
I
0.888
SVE_0429000
Strongyloides venezuelensis
SVE_0429000
I
0.888
PTRK_0000994100
Parastrongyloides trichosuri
PTRK_0000994100
I
0.885
ASU_03657
Ascaris suum
ASU_03657
I
0.880
PEQ_0000722401
Parascaris equorum
PEQ_0000722401
I
0.880
BXY_0599800
Bursaphelenchus xylophilus
BXY_0599800
I
0.879
GPLIN_000337500
Globodera pallida
GPLIN_000337500
I
0.876
PTRK_0000480700
Parastrongyloides trichosuri
PTRK_0000480700
I
0.875
SPAL_0001712900
Strongyloides papillosus
SPAL_0001712900
I
0.875
SSTP_0001253400
Strongyloides stercoralis
SSTP_0001253400
I
0.875
SVE_0146100
Strongyloides venezuelensis
SVE_0146100
I
0.875
BXY_0631600
Bursaphelenchus xylophilus
BXY_0631600
I
0.869
scaffold598-EXSNAP2012.5
Pristionchus exspectatus
scaffold598-EXSNAP2012.5
I
0.869
SPAL_0001238400
Strongyloides papillosus
SPAL_0001238400
I
0.868
SVE_0697700
Strongyloides venezuelensis
SVE_0697700
I
0.868
scaffold251-EXSNAP2012.44
Pristionchus exspectatus
scaffold251-EXSNAP2012.44
I
0.865
scaffold826-EXSNAP2012.10
Pristionchus exspectatus
scaffold826-EXSNAP2012.10
I
0.865
PPA06637
Pristionchus pacificus
PPA06637
I
0.864
RSKR_0000342500
Rhabditophanes kr3021
RSKR_0000342500
I
0.861
nRc.2.0.1.g16639
Romanomermis culicivorax
nRc.2.0.1.g16639
I
0.859
HCOI00891400
Haemonchus contortus
HCOI00891400
I
0.858
NECAME_11999
Necator americanus
NECAME_11999
I
0.858
PPA29597
Pristionchus pacificus
PPA29597
I
0.853
L889_g1557
Steinernema feltiae
L889_g1557
I
0.852
MhA1_Contig2491.frz3.gene4
Meloidogyne hapla
MhA1_Contig2491.frz3.gene4
I
0.852
ASIM_0001423201
Anisakis simplex
ASIM_0001423201
I
0.849
L596_g11029
Steinernema carpocapsae
L596_g11029
I
0.849
L892_g1520
Steinernema scapterisci
L892_g1520
I
0.849
L898_g9866
Steinernema monticolum
L898_g9866
I
0.849
CBN18824
Caenorhabditis brenneri
CBN18824
I
0.846
CBN19472
Caenorhabditis brenneri
CBN19472
I
0.846
ANCCAN_08267
Ancylostoma caninum
ANCCAN_08267
I
0.846
NBR_0001473401
Nippostrongylus brasiliensis
NBR_0001473401
I
0.846
ALUE_0000387101
Ascaris lumbricoides
ALUE_0000387101
I
0.843
ASU_00859
Ascaris suum
ASU_00859
I
0.843
L596_g12321
Steinernema carpocapsae
L596_g12321
I
0.843
L889_g29879
Steinernema feltiae
L889_g29879
I
0.843
L893_g3010
Steinernema glaseri
L893_g3010
I
0.843
L898_g2764
Steinernema monticolum
L898_g2764
I
0.843
SSTP_0001170700
Strongyloides stercoralis
SSTP_0001170700
I
0.843
nhr-10
Caenorhabditis elegans
WBGene00003609
I
0.842
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0
I
0.842
L892_g4169
Steinernema scapterisci
L892_g4169
I
0.842
L893_g28857
Steinernema glaseri
L893_g28857
I
0.842
Bm5319
Brugia malayi
Bm5319
I
0.841
LOAG_00300
Loa loa
LOAG_00300
I
0.841
BTMF_0001388101
Brugia timori
BTMF_0001388101
I
0.841
DME_0000693601
Dracunculus medinensis
DME_0000693601
I
0.841
nDi.2.2.2.g02318
Dirofilaria immitis
nDi.2.2.2.g02318
I
0.841
nOo.2.0.1.g01530
Onchocerca ochengi
nOo.2.0.1.g01530
I
0.841
OFLC_0001450101
Onchocerca flexuosa
OFLC_0001450101
I
0.841
TCLT_0000399401
Thelazia callipaeda
TCLT_0000399401
I
0.841
PTRK_0000861400
Parastrongyloides trichosuri
PTRK_0000861400
I
0.840
HPLM_0000769401
Haemonchus placei
HPLM_0000769401
I
0.838
MhA1_Contig691.frz3.gene13
Meloidogyne hapla
MhA1_Contig691.frz3.gene13
I
0.836
scaffold1039-EXSNAP2012.5
Pristionchus exspectatus
scaffold1039-EXSNAP2012.5
I
0.836
SMUV_0000708401
Syphacia muris
SMUV_0000708401
I
0.836
Minc11307
Meloidogyne incognita
Minc11307
I
0.832
EVEC_0000027301
Enterobius vermicularis
EVEC_0000027301
I
0.832
CBG04204
Caenorhabditis briggsae
CBG04204
I
0.830
HCOI01292200
Haemonchus contortus
HCOI01292200
I
0.830
L889_g17254
Steinernema feltiae
L889_g17254
I
0.830
L898_g7537
Steinernema monticolum
L898_g7537
I
0.830
WBGene00241993
Onchocerca volvulus
WBGene00241993
I
0.829
MhA1_Contig70.frz3.gene31
Meloidogyne hapla
MhA1_Contig70.frz3.gene31
I
0.829
scaffold43-EXSNAP2012.41
Pristionchus exspectatus
scaffold43-EXSNAP2012.41
I
0.829
ASIM_0001569801
Anisakis simplex
ASIM_0001569801
I
0.828
SMUV_0000369301
Syphacia muris
SMUV_0000369301
I
0.828
CRE25378
Caenorhabditis remanei
CRE25378
I
0.827
L892_g17612
Steinernema scapterisci
L892_g17612
I
0.826
CBG16594
Caenorhabditis briggsae
CBG16594
I
0.825
CBN20518
Caenorhabditis brenneri
CBN20518
I
0.825
NECAME_08394
Necator americanus
NECAME_08394
I
0.825
PTRK_0001312000
Parastrongyloides trichosuri
PTRK_0001312000
I
0.825
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0
I
0.824
SSTP_0000546600
Strongyloides stercoralis
SSTP_0000546600
I
0.824
CBG01866
Caenorhabditis briggsae
CBG01866
I
0.823
CBN19235
Caenorhabditis brenneri
CBN19235
I
0.823
CJA13458
Caenorhabditis japonica
CJA13458
I
0.823
CRE03310
Caenorhabditis remanei
CRE03310
I
0.823
nhr-1
Caenorhabditis elegans
WBGene00003600
D
0.823
ANCCEY_01961
Ancylostoma ceylanicum
ANCCEY_01961
I
0.823
HCOI01554200
Haemonchus contortus
HCOI01554200
I
0.823
HPBE_0000837301
Heligmosomoides bakeri
HPBE_0000837301
I
0.823
L898_g22454
Steinernema monticolum
L898_g22454
I
0.823
SPAL_0001213800
Strongyloides papillosus
SPAL_0001213800
I
0.823
SVE_0639400
Strongyloides venezuelensis
SVE_0639400
I
0.823
Minc02318
Meloidogyne incognita
Minc02318
I
0.821
Minc05752
Meloidogyne incognita
Minc05752
I
0.821
ANCCAN_14103
Ancylostoma caninum
ANCCAN_14103
I
0.820
ANCCAN_17081
Ancylostoma caninum
ANCCAN_17081
I
0.820
HCOI00601000
Haemonchus contortus
HCOI00601000
I
0.820
HPLM_0000564201
Haemonchus placei
HPLM_0000564201
I
0.820
L596_g23777
Steinernema carpocapsae
L596_g23777
I
0.819
L893_g25227
Steinernema glaseri
L893_g25227
I
0.819
SPAL_0000490500
Strongyloides papillosus
SPAL_0000490500
I
0.819
SVE_1951500
Strongyloides venezuelensis
SVE_1951500
I
0.819
L596_g12276
Steinernema carpocapsae
L596_g12276
I
0.818
L889_g7780
Steinernema feltiae
L889_g7780
I
0.818
L892_g8671
Steinernema scapterisci
L892_g8671
I
0.818
ALUE_0002179401
Ascaris lumbricoides
ALUE_0002179401
I
0.817
ASU_12501
Ascaris suum
ASU_12501
I
0.817
NECAME_00872
Necator americanus
NECAME_00872
I
0.817
nhr-64
Caenorhabditis elegans
WBGene00003654
I
0.816
ACOC_0000700901
Angiostrongylus costaricensis
ACOC_0000700901
I
0.816
DICVIV_09815
Dictyocaulus viviparus
DICVIV_09815
I
0.816
EVEC_0001195701
Enterobius vermicularis
EVEC_0001195701
I
0.815
L893_g3565
Steinernema glaseri
L893_g3565
I
0.815
SBAD_0000391501
Soboliphyme baturini
SBAD_0000391501
I
0.811
CBG03848
Caenorhabditis briggsae
CBG03848
I
0.810
CBN11344
Caenorhabditis brenneri
CBN11344
I
0.810
CBN14643
Caenorhabditis brenneri
CBN14643
I
0.810
CJA14599
Caenorhabditis japonica
CJA14599
I
0.810
CRE08089
Caenorhabditis remanei
CRE08089
I
0.810
nhr-69
Caenorhabditis elegans
WBGene00003659
I
0.810
L596_g27472
Steinernema carpocapsae
L596_g27472
I
0.810
scaffold426-EXSNAP2012.35
Pristionchus exspectatus
scaffold426-EXSNAP2012.35
I
0.809
CRE30089
Caenorhabditis remanei
CRE30089
I
0.808
PTRK_0000862000
Parastrongyloides trichosuri
PTRK_0000862000
I
0.808
SSTP_0001140400
Strongyloides stercoralis
SSTP_0001140400
I
0.808
EVEC_0001313601
Enterobius vermicularis
EVEC_0001313601
I
0.807
CBG10857
Caenorhabditis briggsae
CBG10857
I
0.806
CJA00680
Caenorhabditis japonica
CJA00680
I
0.806
CRE00606
Caenorhabditis remanei
CRE00606
I
0.806
nhr-173
Caenorhabditis elegans
WBGene00016975
I
0.806
CBN24827
Caenorhabditis brenneri
CBN24827
I
0.803
L889_g1891
Steinernema feltiae
L889_g1891
I
0.803
CBG03860
Caenorhabditis briggsae
CBG03860
I
0.801
CBN05776
Caenorhabditis brenneri
CBN05776
I
0.801
CJA19445
Caenorhabditis japonica
CJA19445
I
0.801
CRE00149
Caenorhabditis remanei
CRE00149
I
0.801
CRE08264
Caenorhabditis remanei
CRE08264
I
0.801
nhr-62
Caenorhabditis elegans
WBGene00003652
I
0.801
HCOI01945300
Haemonchus contortus
HCOI01945300
I
0.801
HCOI02126500
Haemonchus contortus
HCOI02126500
I
0.801
HPBE_0001438801
Heligmosomoides bakeri
HPBE_0001438801
I
0.801
HPLM_0001358001
Haemonchus placei
HPLM_0001358001
I
0.801
CBG10855
Caenorhabditis briggsae
CBG10855
I
0.800
CJA08896
Caenorhabditis japonica
CJA08896
I
0.800
nhr-120
Caenorhabditis elegans
WBGene00003710
I
0.800
Hba_17038
Heterorhabditis bacteriophora
Hba_17038
I
0.800
PPA21777
Pristionchus pacificus
PPA21777
I
0.794
LOAG_16377
Loa loa
LOAG_16377
I
0.792
BTMF_0000941401
Brugia timori
BTMF_0000941401
I
0.792
BXY_1057700
Bursaphelenchus xylophilus
BXY_1057700
I
0.790
nRc.2.0.1.g00257
Romanomermis culicivorax
nRc.2.0.1.g00257
I
0.790
EEL_0000989101
Elaeophora elaphi
EEL_0000989101
I
0.789
EVEC_0000506001
Enterobius vermicularis
EVEC_0000506001
N
0.789
EFV54558
Trichinella spiralis
EFV54558
I
0.787
D917_06779
Trichinella nativa
D917_06779
I
0.787
WBGene00240403
Onchocerca volvulus
WBGene00240403
I
0.786
scaffold552-EXSNAP2012.18
Pristionchus exspectatus
scaffold552-EXSNAP2012.18
I
0.786
L596_g11032
Steinernema carpocapsae
L596_g11032
I
0.781
L892_g1523
Steinernema scapterisci
L892_g1523
I
0.781
TMUE_s0002006800
Trichuris muris
TMUE_s0002006800
I
0.780
ACAC_0001297301
Angiostrongylus cantonensis
ACAC_0001297301
I
0.776
ENSLOCG00000013459
Lepisosteus oculatus
ENSLOCG00000013459
I
0.760
ANCCEY_01254
Ancylostoma ceylanicum
ANCCEY_01254
I
0.757
RSKR_0001171300
Rhabditophanes kr3021
RSKR_0001171300
I
0.755
Ppa-nhr-3
Pristionchus pacificus
PPA28597
I
0.751
scaffold395-EXSNAP2012.23
Pristionchus exspectatus
scaffold395-EXSNAP2012.23
I
0.751
scaffold488-EXSNAP2012.17
Pristionchus exspectatus
scaffold488-EXSNAP2012.17
I
0.748
HPBE_0000704501
Heligmosomoides bakeri
HPBE_0000704501
I
0.746