scaffold598-EXSNAP2012.5 (Pristionchus exspectatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 scaffold598-EXSNAP2012.5 T310287_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.937 0.614
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.825 0.529
nhr-204
M00704_2.00 		Caenorhabditis elegans
NDNTGRTMHN
NDKAYCANHN		 PBM
Narasimhan et al.(2015)
pTH10028 		0.758 0.443
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold598-EXSNAP2012.5 Nuclear receptor 28 102

Links

Other Nuclear receptor family TFs
Other Pristionchus exspectatus TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.992
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.992
PPA06637 Pristionchus pacificus PPA06637 I 0.989
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.973
PPA29597 Pristionchus pacificus PPA29597 I 0.948
L893_g28857 Steinernema glaseri L893_g28857 I 0.943
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.942
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.942
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.942
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.941
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.940
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.940
L889_g1557 Steinernema feltiae L889_g1557 I 0.940
L898_g9866 Steinernema monticolum L898_g9866 I 0.940
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.940
PPA21777 Pristionchus pacificus PPA21777 I 0.939
NECAME_08394 Necator americanus NECAME_08394 I 0.939
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.939
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.939
Bm4980 Brugia malayi Bm4980 I 0.938
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.938
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.938
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.938
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.938
CBG03844 Caenorhabditis briggsae CBG03844 I 0.937
CBN18198 Caenorhabditis brenneri CBN18198 I 0.937
CBN20749 Caenorhabditis brenneri CBN20749 I 0.937
CRE08259 Caenorhabditis remanei CRE08259 I 0.937
LOAG_08615 Loa loa LOAG_08615 I 0.937
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.937
ASU_03870 Ascaris suum ASU_03870 I 0.937
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.937
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.937
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.937
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.936
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.936
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.936
CJA00680 Caenorhabditis japonica CJA00680 I 0.934
CBN24827 Caenorhabditis brenneri CBN24827 I 0.925
CRE00149 Caenorhabditis remanei CRE00149 I 0.924
L892_g4169 Steinernema scapterisci L892_g4169 I 0.923
CBG10855 Caenorhabditis briggsae CBG10855 I 0.922
CJA08896 Caenorhabditis japonica CJA08896 I 0.922
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.922
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.916
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.916
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.916
L893_g3565 Steinernema glaseri L893_g3565 I 0.915
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.915
L892_g17612 Steinernema scapterisci L892_g17612 I 0.914
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.914
CBG10857 Caenorhabditis briggsae CBG10857 I 0.911
CRE00606 Caenorhabditis remanei CRE00606 I 0.911
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.911
L893_g13285 Steinernema glaseri L893_g13285 I 0.908
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.907
L889_g17247 Steinernema feltiae L889_g17247 I 0.907
L898_g26357 Steinernema monticolum L898_g26357 I 0.907
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.905
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.903
L889_g1891 Steinernema feltiae L889_g1891 I 0.903
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.903
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.903
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.903
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.903
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.903
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.903
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.903
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.903
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.902
ASU_03657 Ascaris suum ASU_03657 I 0.893
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.893
L889_g11570 Steinernema feltiae L889_g11570 I 0.892
L893_g21283 Steinernema glaseri L893_g21283 I 0.892
L898_g23058 Steinernema monticolum L898_g23058 I 0.892
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.891
L892_g4134 Steinernema scapterisci L892_g4134 I 0.891
PPA24481 Pristionchus pacificus PPA24481 I 0.887
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.887
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.882
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.882
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.873
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.869
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.868
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.867
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.865
ASU_13587 Ascaris suum ASU_13587 I 0.855
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.855
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.855
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.854
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.854
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.854
LOAG_08636 Loa loa LOAG_08636 I 0.853
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.853
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.852
LOAG_16377 Loa loa LOAG_16377 I 0.851
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.851
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.849
scaffold1383-EXSNAP2012.1 Pristionchus exspectatus scaffold1383-EXSNAP2012.1 N 0.849
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.846
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.846
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.846
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.846
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.845
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.844
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.844
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.844
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.842
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.842
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.840
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.838
NECAME_01944 Necator americanus NECAME_01944 I 0.837
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.834
Minc13747 Meloidogyne incognita Minc13747 I 0.832
Minc17538 Meloidogyne incognita Minc17538 I 0.832
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.832
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.832
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.831
Minc11307 Meloidogyne incognita Minc11307 I 0.830
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.830
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.829
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.827
CBG01866 Caenorhabditis briggsae CBG01866 I 0.825
CBN19235 Caenorhabditis brenneri CBN19235 I 0.825
CJA13458 Caenorhabditis japonica CJA13458 I 0.825
CRE03310 Caenorhabditis remanei CRE03310 I 0.825
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.825
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.825
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.825
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.825
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.824
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.821
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.821
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.821
Bm5319 Brugia malayi Bm5319 I 0.819
LOAG_00300 Loa loa LOAG_00300 I 0.819
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.819
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.819
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.819
L889_g29879 Steinernema feltiae L889_g29879 I 0.819
L893_g3010 Steinernema glaseri L893_g3010 I 0.819
L898_g2764 Steinernema monticolum L898_g2764 I 0.819
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.819
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.819
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.819
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.819
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.815
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.815
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.815
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.814
NECAME_11999 Necator americanus NECAME_11999 I 0.810
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.809
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.809
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.809
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.809
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.809
PPA22443 Pristionchus pacificus PPA22443 I 0.808
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.808
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.808
L893_g25227 Steinernema glaseri L893_g25227 I 0.808
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I 0.808
CBG16594 Caenorhabditis briggsae CBG16594 I 0.806
CBN20518 Caenorhabditis brenneri CBN20518 I 0.806
CRE25378 Caenorhabditis remanei CRE25378 I 0.806
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.806
ASU_12501 Ascaris suum ASU_12501 I 0.806
NECAME_00872 Necator americanus NECAME_00872 I 0.806
CBN18824 Caenorhabditis brenneri CBN18824 I 0.805
CBN19472 Caenorhabditis brenneri CBN19472 I 0.805
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.804
MhA1_Contig70.frz3.gene31 Meloidogyne hapla MhA1_Contig70.frz3.gene31 I 0.802
HCOI00891400 Haemonchus contortus HCOI00891400 I 0.799
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.797
L889_g7780 Steinernema feltiae L889_g7780 I 0.797
L892_g8671 Steinernema scapterisci L892_g8671 I 0.797
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.797
ASU_02757 Ascaris suum ASU_02757 N 0.796
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.794
PPA10975 Pristionchus pacificus PPA10975 N 0.793
L898_g22454 Steinernema monticolum L898_g22454 I 0.791
SPAL_0001213800 Strongyloides papillosus SPAL_0001213800 I 0.790
SVE_0639400 Strongyloides venezuelensis SVE_0639400 I 0.790
CBG04204 Caenorhabditis briggsae CBG04204 I 0.789
ANCCAN_08267 Ancylostoma caninum ANCCAN_08267 I 0.782
NBR_0001473401 Nippostrongylus brasiliensis NBR_0001473401 I 0.782
PTRK_0000038300 Parastrongyloides trichosuri PTRK_0000038300 N 0.776
CBN23409 Caenorhabditis brenneri CBN23409 I 0.774
CBN28056 Caenorhabditis brenneri CBN28056 I 0.774
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.774
PTRK_0000862000 Parastrongyloides trichosuri PTRK_0000862000 I 0.773
SSTP_0001140400 Strongyloides stercoralis SSTP_0001140400 I 0.772
CBN29725 Caenorhabditis brenneri CBN29725 I 0.767
CRE27053 Caenorhabditis remanei CRE27053 I 0.767
PPA24468 Pristionchus pacificus PPA24468 I 0.766
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.766
CRE30089 Caenorhabditis remanei CRE30089 I 0.763
tetur01g10970 Tetranychus urticae tetur01g10970 I 0.763
ASIM_0001848201 Anisakis simplex ASIM_0001848201 N 0.759
CBG09380 Caenorhabditis briggsae CBG09380 I 0.758
nhr-204 Caenorhabditis elegans WBGene00019816 D 0.758
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.758
RSKR_0001067400 Rhabditophanes kr3021 RSKR_0001067400 I 0.755
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.754
CBN11572 Caenorhabditis brenneri CBN11572 I 0.753
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.753
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.753
HCOI00592600 Haemonchus contortus HCOI00592600 I 0.750
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.748
OESDEN_04341 Oesophagostomum dentatum OESDEN_04341 I 0.748
CBG14485 Caenorhabditis briggsae CBG14485 I 0.746
CJA16040 Caenorhabditis japonica CJA16040 I 0.746
CRE00809 Caenorhabditis remanei CRE00809 I 0.746
Smp_174700 Schistosoma mansoni Smp_174700 I 0.746
B_00901 Schistosoma haematobium B_00901 I 0.746
SROB_0001376101 Schistosoma rodhaini SROB_0001376101 I 0.746