scaffold552-EXSNAP2012.18 (Pristionchus exspectatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 scaffold552-EXSNAP2012.18 T310279_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.827 0.543
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.814 0.586
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.812 0.586
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.792 0.514
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.787 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold552-EXSNAP2012.18 Nuclear receptor 81 155

Links

Other Nuclear receptor family TFs
Other Pristionchus exspectatus TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PPA29597 Pristionchus pacificus PPA29597 I 0.973
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.973
PPA06637 Pristionchus pacificus PPA06637 I 0.971
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.969
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.969
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.965
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.951
L892_g4169 Steinernema scapterisci L892_g4169 I 0.948
L893_g28857 Steinernema glaseri L893_g28857 I 0.948
CBG10855 Caenorhabditis briggsae CBG10855 I 0.946
CBN24827 Caenorhabditis brenneri CBN24827 I 0.946
CJA08896 Caenorhabditis japonica CJA08896 I 0.946
CRE00149 Caenorhabditis remanei CRE00149 I 0.946
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.946
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.946
L889_g1557 Steinernema feltiae L889_g1557 I 0.945
L898_g9866 Steinernema monticolum L898_g9866 I 0.945
L893_g3565 Steinernema glaseri L893_g3565 I 0.944
L892_g17612 Steinernema scapterisci L892_g17612 I 0.942
NECAME_08394 Necator americanus NECAME_08394 I 0.942
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.940
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.940
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.939
PPA21777 Pristionchus pacificus PPA21777 I 0.937
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.937
L889_g1891 Steinernema feltiae L889_g1891 I 0.936
CBG10857 Caenorhabditis briggsae CBG10857 I 0.930
CJA00680 Caenorhabditis japonica CJA00680 I 0.930
CRE00606 Caenorhabditis remanei CRE00606 I 0.930
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.930
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.922
ASU_03657 Ascaris suum ASU_03657 I 0.922
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.922
PPA24481 Pristionchus pacificus PPA24481 I 0.921
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.921
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.905
NECAME_01944 Necator americanus NECAME_01944 I 0.900
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.894
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.894
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.894
LOAG_16377 Loa loa LOAG_16377 I 0.889
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.889
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.886
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.875
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.871
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.869
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.869
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.869
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.869
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.861
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.855
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.847
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.844
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.844
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.844
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.843
CBN29725 Caenorhabditis brenneri CBN29725 I 0.838
CRE27053 Caenorhabditis remanei CRE27053 I 0.838
PPA10975 Pristionchus pacificus PPA10975 N 0.838
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.838
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.838
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.838
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.835
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.834
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.833
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.833
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.831
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.831
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.831
Bm4980 Brugia malayi Bm4980 I 0.829
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.829
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.829
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.828
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.828
CBG03844 Caenorhabditis briggsae CBG03844 I 0.827
CBN18198 Caenorhabditis brenneri CBN18198 I 0.827
CBN20749 Caenorhabditis brenneri CBN20749 I 0.827
CRE08259 Caenorhabditis remanei CRE08259 I 0.827
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.827
ASU_03870 Ascaris suum ASU_03870 I 0.827
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.827
L893_g13285 Steinernema glaseri L893_g13285 I 0.827
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.827
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.827
LOAG_08615 Loa loa LOAG_08615 I 0.826
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.826
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.826
L889_g17247 Steinernema feltiae L889_g17247 I 0.826
L898_g26357 Steinernema monticolum L898_g26357 I 0.826
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.824
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.824
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.821
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.819
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.819
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.819
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.819
PPA24468 Pristionchus pacificus PPA24468 I 0.818
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.818
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.814
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.813
CBG23380 Caenorhabditis briggsae CBG23380 D 0.812
CBN28497 Caenorhabditis brenneri CBN28497 I 0.812
CRE27050 Caenorhabditis remanei CRE27050 I 0.812
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.810
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.810
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.810
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.810
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.809
ASU_02757 Ascaris suum ASU_02757 N 0.806
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.805
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.800
CBG23381 Caenorhabditis briggsae CBG23381 I 0.797
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.793
CBG26996 Caenorhabditis briggsae CBG26996 I 0.792
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.792
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.792
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.790
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.790
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.790
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.789
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.789
CBG01866 Caenorhabditis briggsae CBG01866 I 0.787
CBN19235 Caenorhabditis brenneri CBN19235 I 0.787
CJA13458 Caenorhabditis japonica CJA13458 I 0.787
CRE03310 Caenorhabditis remanei CRE03310 I 0.787
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.787
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.787
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.787
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.787
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.787
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.787
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.786
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.786
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.785
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.785
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.784
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.784
L889_g11570 Steinernema feltiae L889_g11570 I 0.784
L893_g21283 Steinernema glaseri L893_g21283 I 0.784
L898_g23058 Steinernema monticolum L898_g23058 I 0.784
CBN28791 Caenorhabditis brenneri CBN28791 I 0.783
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.783
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.783
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.782
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.782
L892_g4134 Steinernema scapterisci L892_g4134 I 0.782
L893_g25227 Steinernema glaseri L893_g25227 I 0.782
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.781
ASU_12501 Ascaris suum ASU_12501 I 0.781
NECAME_00872 Necator americanus NECAME_00872 I 0.781
Bm5319 Brugia malayi Bm5319 I 0.780
LOAG_00300 Loa loa LOAG_00300 I 0.780
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.780
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.780
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.780
L889_g29879 Steinernema feltiae L889_g29879 I 0.780
L893_g3010 Steinernema glaseri L893_g3010 I 0.780
L898_g2764 Steinernema monticolum L898_g2764 I 0.780
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.780
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.780
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.780
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.780
ASU_13587 Ascaris suum ASU_13587 I 0.777
CRE27052 Caenorhabditis remanei CRE27052 I 0.776
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.775
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.774
L889_g7780 Steinernema feltiae L889_g7780 I 0.774
L892_g8671 Steinernema scapterisci L892_g8671 I 0.774
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.773
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.768
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.768
L898_g22454 Steinernema monticolum L898_g22454 I 0.768
CJA41479 Caenorhabditis japonica CJA41479 I 0.766
PPA27013 Pristionchus pacificus PPA27013 N 0.761
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.761
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.759
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.759
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.759
CBG23379 Caenorhabditis briggsae CBG23379 I 0.752
CBG16594 Caenorhabditis briggsae CBG16594 I 0.750
CBN20518 Caenorhabditis brenneri CBN20518 I 0.750
CRE25378 Caenorhabditis remanei CRE25378 I 0.750
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.749
CBG09380 Caenorhabditis briggsae CBG09380 I 0.748
LOAG_08636 Loa loa LOAG_08636 I 0.746
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.746
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.746
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.746
scaffold1383-EXSNAP2012.1 Pristionchus exspectatus scaffold1383-EXSNAP2012.1 N 0.746