CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPA10975
(
Pristionchus pacificus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
PPA10975
T305882_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA10975
Nuclear receptor
73
144
EDCAVCGDTATGYHYEVASCNGCKTFFRRTILDQRIFECKKSGDCFIALLKEKRCQCRACRFQKCVENQMFM
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus pacificus
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPA24481
Pristionchus pacificus
PPA24481
I
0.947
scaffold552-EXSNAP2012.17
Pristionchus exspectatus
scaffold552-EXSNAP2012.17
I
0.947
TCLT_0000256201
Thelazia callipaeda
TCLT_0000256201
I
0.905
CRE00149
Caenorhabditis remanei
CRE00149
I
0.903
scaffold43-EXSNAP2012.41
Pristionchus exspectatus
scaffold43-EXSNAP2012.41
I
0.901
L889_g1557
Steinernema feltiae
L889_g1557
I
0.900
L898_g9866
Steinernema monticolum
L898_g9866
I
0.900
PPA21777
Pristionchus pacificus
PPA21777
I
0.898
CBN24827
Caenorhabditis brenneri
CBN24827
I
0.896
L893_g28857
Steinernema glaseri
L893_g28857
I
0.895
CBG10855
Caenorhabditis briggsae
CBG10855
I
0.894
CJA08896
Caenorhabditis japonica
CJA08896
I
0.894
nhr-120
Caenorhabditis elegans
WBGene00003710
I
0.894
L892_g4169
Steinernema scapterisci
L892_g4169
I
0.893
EEL_0000989101
Elaeophora elaphi
EEL_0000989101
I
0.892
L892_g17612
Steinernema scapterisci
L892_g17612
I
0.891
CBG10857
Caenorhabditis briggsae
CBG10857
I
0.890
CJA00680
Caenorhabditis japonica
CJA00680
I
0.890
CRE00606
Caenorhabditis remanei
CRE00606
I
0.890
nhr-173
Caenorhabditis elegans
WBGene00016975
I
0.890
NECAME_08394
Necator americanus
NECAME_08394
I
0.890
L893_g3565
Steinernema glaseri
L893_g3565
I
0.889
L596_g23863
Steinernema carpocapsae
L596_g23863
I
0.887
LOAG_16377
Loa loa
LOAG_16377
I
0.885
BTMF_0000941401
Brugia timori
BTMF_0000941401
I
0.885
ANCCEY_01254
Ancylostoma ceylanicum
ANCCEY_01254
I
0.883
ASIM_0001569801
Anisakis simplex
ASIM_0001569801
I
0.881
ASU_03657
Ascaris suum
ASU_03657
I
0.881
HPLM_0000769401
Haemonchus placei
HPLM_0000769401
I
0.881
PEQ_0000722401
Parascaris equorum
PEQ_0000722401
I
0.881
WBGene00240403
Onchocerca volvulus
WBGene00240403
I
0.879
HCOI01292200
Haemonchus contortus
HCOI01292200
I
0.879
NECAME_01944
Necator americanus
NECAME_01944
I
0.874
L596_g27472
Steinernema carpocapsae
L596_g27472
I
0.870
HPBE_0001246601
Heligmosomoides bakeri
HPBE_0001246601
I
0.869
scaffold426-EXSNAP2012.35
Pristionchus exspectatus
scaffold426-EXSNAP2012.35
I
0.863
ANCCAN_09880
Ancylostoma caninum
ANCCAN_09880
I
0.860
PPA29597
Pristionchus pacificus
PPA29597
I
0.851
HCOI01525900
Haemonchus contortus
HCOI01525900
I
0.851
HPBE_0000704501
Heligmosomoides bakeri
HPBE_0000704501
I
0.842
scaffold552-EXSNAP2012.18
Pristionchus exspectatus
scaffold552-EXSNAP2012.18
I
0.838
L889_g1891
Steinernema feltiae
L889_g1891
I
0.826
PPA06637
Pristionchus pacificus
PPA06637
I
0.816
scaffold204-EXSNAP2012.8
Pristionchus exspectatus
scaffold204-EXSNAP2012.8
N
0.802
scaffold598-EXSNAP2012.5
Pristionchus exspectatus
scaffold598-EXSNAP2012.5
I
0.793
EVEC_0001313601
Enterobius vermicularis
EVEC_0001313601
I
0.785
scaffold251-EXSNAP2012.44
Pristionchus exspectatus
scaffold251-EXSNAP2012.44
I
0.774
scaffold826-EXSNAP2012.10
Pristionchus exspectatus
scaffold826-EXSNAP2012.10
I
0.774
RSKR_0000342500
Rhabditophanes kr3021
RSKR_0000342500
I
0.771
Ppa-nhr-120
Pristionchus pacificus
PPA00183
I
0.760
PPA24468
Pristionchus pacificus
PPA24468
I
0.760
scaffold265-EXSNAP2012.2
Pristionchus exspectatus
scaffold265-EXSNAP2012.2
I
0.760
scaffold384-EXSNAP2012.4
Pristionchus exspectatus
scaffold384-EXSNAP2012.4
I
0.760
scaffold572-EXSNAP2012.7
Pristionchus exspectatus
scaffold572-EXSNAP2012.7
I
0.760
Hba_12763
Heterorhabditis bacteriophora
Hba_12763
I
0.757