CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCLT_0000256201
(
Thelazia callipaeda
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
TCLT_0000256201
T310757_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.897
0.647
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.757
0.559
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TCLT_0000256201-mRNA-1
Nuclear receptor
8
75
ESCAVCGDLATGFHYDVASCNGKTFFRRTLVSNRIYKCYKNGNCTFDKDMRCACRACRFNKCVACNRT
Links
Other
Nuclear receptor
family TFs
Other
Thelazia callipaeda
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EEL_0000989101
Elaeophora elaphi
EEL_0000989101
I
0.978
LOAG_16377
Loa loa
LOAG_16377
I
0.976
WBGene00240403
Onchocerca volvulus
WBGene00240403
I
0.976
BTMF_0000941401
Brugia timori
BTMF_0000941401
I
0.976
scaffold43-EXSNAP2012.41
Pristionchus exspectatus
scaffold43-EXSNAP2012.41
I
0.953
ASIM_0001569801
Anisakis simplex
ASIM_0001569801
I
0.946
ASU_03657
Ascaris suum
ASU_03657
I
0.946
NECAME_08394
Necator americanus
NECAME_08394
I
0.946
PEQ_0000722401
Parascaris equorum
PEQ_0000722401
I
0.946
CBG10855
Caenorhabditis briggsae
CBG10855
I
0.945
CJA08896
Caenorhabditis japonica
CJA08896
I
0.945
nhr-120
Caenorhabditis elegans
WBGene00003710
I
0.945
CBN24827
Caenorhabditis brenneri
CBN24827
I
0.944
CRE00149
Caenorhabditis remanei
CRE00149
I
0.944
HCOI01292200
Haemonchus contortus
HCOI01292200
I
0.942
HPLM_0000769401
Haemonchus placei
HPLM_0000769401
I
0.942
L889_g1557
Steinernema feltiae
L889_g1557
I
0.938
L892_g4169
Steinernema scapterisci
L892_g4169
I
0.938
L893_g28857
Steinernema glaseri
L893_g28857
I
0.938
L898_g9866
Steinernema monticolum
L898_g9866
I
0.938
L893_g3565
Steinernema glaseri
L893_g3565
I
0.935
L892_g17612
Steinernema scapterisci
L892_g17612
I
0.934
PPA21777
Pristionchus pacificus
PPA21777
I
0.932
L596_g27472
Steinernema carpocapsae
L596_g27472
I
0.925
L596_g23863
Steinernema carpocapsae
L596_g23863
I
0.923
HPBE_0000704501
Heligmosomoides bakeri
HPBE_0000704501
I
0.906
PPA10975
Pristionchus pacificus
PPA10975
N
0.905
ANCCEY_01254
Ancylostoma ceylanicum
ANCCEY_01254
I
0.902
L889_g1891
Steinernema feltiae
L889_g1891
I
0.901
CBG01866
Caenorhabditis briggsae
CBG01866
I
0.897
CBN19235
Caenorhabditis brenneri
CBN19235
I
0.897
CJA13458
Caenorhabditis japonica
CJA13458
I
0.897
CRE03310
Caenorhabditis remanei
CRE03310
I
0.897
nhr-1
Caenorhabditis elegans
WBGene00003600
D
0.897
ANCCEY_01961
Ancylostoma ceylanicum
ANCCEY_01961
I
0.897
HCOI01554200
Haemonchus contortus
HCOI01554200
I
0.897
HPBE_0000837301
Heligmosomoides bakeri
HPBE_0000837301
I
0.897
Bm5319
Brugia malayi
Bm5319
I
0.893
LOAG_00300
Loa loa
LOAG_00300
I
0.893
BTMF_0001388101
Brugia timori
BTMF_0001388101
I
0.893
DME_0000693601
Dracunculus medinensis
DME_0000693601
I
0.893
nDi.2.2.2.g02318
Dirofilaria immitis
nDi.2.2.2.g02318
I
0.893
nOo.2.0.1.g01530
Onchocerca ochengi
nOo.2.0.1.g01530
I
0.893
OFLC_0001450101
Onchocerca flexuosa
OFLC_0001450101
I
0.893
TCLT_0000399401
Thelazia callipaeda
TCLT_0000399401
I
0.893
ACOC_0000700901
Angiostrongylus costaricensis
ACOC_0000700901
I
0.892
DICVIV_09815
Dictyocaulus viviparus
DICVIV_09815
I
0.892
L596_g12321
Steinernema carpocapsae
L596_g12321
I
0.891
L889_g29879
Steinernema feltiae
L889_g29879
I
0.891
L893_g3010
Steinernema glaseri
L893_g3010
I
0.891
L898_g2764
Steinernema monticolum
L898_g2764
I
0.891
WBGene00241993
Onchocerca volvulus
WBGene00241993
I
0.884
CBG10857
Caenorhabditis briggsae
CBG10857
I
0.878
CJA00680
Caenorhabditis japonica
CJA00680
I
0.878
CRE00606
Caenorhabditis remanei
CRE00606
I
0.878
nhr-173
Caenorhabditis elegans
WBGene00016975
I
0.878
EVEC_0000027301
Enterobius vermicularis
EVEC_0000027301
I
0.871
scaffold426-EXSNAP2012.35
Pristionchus exspectatus
scaffold426-EXSNAP2012.35
I
0.871
SMUV_0000708401
Syphacia muris
SMUV_0000708401
I
0.871
PPA24481
Pristionchus pacificus
PPA24481
I
0.864
L596_g12276
Steinernema carpocapsae
L596_g12276
I
0.864
L889_g7780
Steinernema feltiae
L889_g7780
I
0.864
L892_g8671
Steinernema scapterisci
L892_g8671
I
0.864
scaffold552-EXSNAP2012.17
Pristionchus exspectatus
scaffold552-EXSNAP2012.17
I
0.864
EVEC_0001313601
Enterobius vermicularis
EVEC_0001313601
I
0.862
MhA1_Contig2491.frz3.gene4
Meloidogyne hapla
MhA1_Contig2491.frz3.gene4
I
0.862
BXY_0631600
Bursaphelenchus xylophilus
BXY_0631600
I
0.860
ACAC_0001297301
Angiostrongylus cantonensis
ACAC_0001297301
I
0.858
BXY_0360200
Bursaphelenchus xylophilus
BXY_0360200
I
0.858
HCOI01525900
Haemonchus contortus
HCOI01525900
I
0.856
NECAME_01944
Necator americanus
NECAME_01944
I
0.855
SSTP_0000546600
Strongyloides stercoralis
SSTP_0000546600
I
0.853
PPA29597
Pristionchus pacificus
PPA29597
I
0.849
SPAL_0000490500
Strongyloides papillosus
SPAL_0000490500
I
0.849
SVE_1951500
Strongyloides venezuelensis
SVE_1951500
I
0.849
HPBE_0001246601
Heligmosomoides bakeri
HPBE_0001246601
I
0.847
L596_g23777
Steinernema carpocapsae
L596_g23777
I
0.845
L893_g25227
Steinernema glaseri
L893_g25227
I
0.845
ALUE_0002179401
Ascaris lumbricoides
ALUE_0002179401
I
0.844
ASU_12501
Ascaris suum
ASU_12501
I
0.844
NECAME_00872
Necator americanus
NECAME_00872
I
0.844
PTRK_0001312000
Parastrongyloides trichosuri
PTRK_0001312000
I
0.844
L898_g22454
Steinernema monticolum
L898_g22454
I
0.842
ANCCAN_09880
Ancylostoma caninum
ANCCAN_09880
I
0.840
Ppa-nhr-120
Pristionchus pacificus
PPA00183
I
0.839
ANCCAN_14103
Ancylostoma caninum
ANCCAN_14103
I
0.839
ANCCAN_17081
Ancylostoma caninum
ANCCAN_17081
I
0.839
ASIM_0001308601
Anisakis simplex
ASIM_0001308601
I
0.839
HCOI00601000
Haemonchus contortus
HCOI00601000
I
0.839
HPLM_0000564201
Haemonchus placei
HPLM_0000564201
I
0.839
scaffold384-EXSNAP2012.4
Pristionchus exspectatus
scaffold384-EXSNAP2012.4
I
0.839
scaffold572-EXSNAP2012.7
Pristionchus exspectatus
scaffold572-EXSNAP2012.7
I
0.839
nhr-10
Caenorhabditis elegans
WBGene00003609
I
0.838
PTRK_0000480700
Parastrongyloides trichosuri
PTRK_0000480700
I
0.828
SPAL_0001712900
Strongyloides papillosus
SPAL_0001712900
I
0.828
SSTP_0001253400
Strongyloides stercoralis
SSTP_0001253400
I
0.828
SVE_0146100
Strongyloides venezuelensis
SVE_0146100
I
0.828
RSKR_0000342500
Rhabditophanes kr3021
RSKR_0000342500
I
0.821
CBG16594
Caenorhabditis briggsae
CBG16594
I
0.820
CBN20518
Caenorhabditis brenneri
CBN20518
I
0.820
SPAL_0001637600
Strongyloides papillosus
SPAL_0001637600
I
0.819
SSTP_0000055100
Strongyloides stercoralis
SSTP_0000055100
I
0.819
SVE_0429000
Strongyloides venezuelensis
SVE_0429000
I
0.819
CRE25378
Caenorhabditis remanei
CRE25378
I
0.818
PTRK_0000994100
Parastrongyloides trichosuri
PTRK_0000994100
I
0.815
SMUV_0000475001
Syphacia muris
SMUV_0000475001
I
0.812
ASU_10584
Ascaris suum
ASU_10584
I
0.811
BXY_0599800
Bursaphelenchus xylophilus
BXY_0599800
I
0.811
L596_g19151
Steinernema carpocapsae
L596_g19151
I
0.811
L889_g22901
Steinernema feltiae
L889_g22901
I
0.811
L892_g5079
Steinernema scapterisci
L892_g5079
I
0.811
L893_g15276
Steinernema glaseri
L893_g15276
I
0.811
L898_g8573
Steinernema monticolum
L898_g8573
I
0.811
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0
I
0.810
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0
I
0.810
ACAC_0000711701
Angiostrongylus cantonensis
ACAC_0000711701
I
0.808
DICVIV_00957
Dictyocaulus viviparus
DICVIV_00957
I
0.808
HCOI00618700
Haemonchus contortus
HCOI00618700
I
0.808
MhA1_Contig320.frz3.gene45
Meloidogyne hapla
MhA1_Contig320.frz3.gene45
I
0.803
scaffold552-EXSNAP2012.18
Pristionchus exspectatus
scaffold552-EXSNAP2012.18
I
0.800
PTRK_0000194200
Parastrongyloides trichosuri
PTRK_0000194200
I
0.791
scaffold314-EXSNAP2012.19
Pristionchus exspectatus
scaffold314-EXSNAP2012.19
I
0.784
nhr-101
Caenorhabditis elegans
WBGene00003691
I
0.777
PTRK_0001020800
Parastrongyloides trichosuri
PTRK_0001020800
I
0.776
SPAL_0001099500
Strongyloides papillosus
SPAL_0001099500
I
0.776
SSTP_0000769100
Strongyloides stercoralis
SSTP_0000769100
I
0.776
SVE_0858700
Strongyloides venezuelensis
SVE_0858700
I
0.776
SPAL_0000231300
Strongyloides papillosus
SPAL_0000231300
I
0.773
SSTP_0000408200
Strongyloides stercoralis
SSTP_0000408200
I
0.773
SVE_1749000
Strongyloides venezuelensis
SVE_1749000
I
0.773
CBG09380
Caenorhabditis briggsae
CBG09380
I
0.771
PTRK_0000720500
Parastrongyloides trichosuri
PTRK_0000720500
I
0.768
SSTP_0000145700
Strongyloides stercoralis
SSTP_0000145700
I
0.768
SPAL_0000841700
Strongyloides papillosus
SPAL_0000841700
I
0.764
SVE_1799100
Strongyloides venezuelensis
SVE_1799100
I
0.764
scaffold251-EXSNAP2012.44
Pristionchus exspectatus
scaffold251-EXSNAP2012.44
I
0.763
scaffold826-EXSNAP2012.10
Pristionchus exspectatus
scaffold826-EXSNAP2012.10
I
0.763
PPA24468
Pristionchus pacificus
PPA24468
I
0.758
scaffold265-EXSNAP2012.2
Pristionchus exspectatus
scaffold265-EXSNAP2012.2
I
0.758
CBG03844
Caenorhabditis briggsae
CBG03844
I
0.757
CBN18198
Caenorhabditis brenneri
CBN18198
I
0.757
CBN20749
Caenorhabditis brenneri
CBN20749
I
0.757
CRE08259
Caenorhabditis remanei
CRE08259
I
0.757
nhr-49
Caenorhabditis elegans
WBGene00003639
D
0.757
ASU_03870
Ascaris suum
ASU_03870
I
0.757
BXY_1057600
Bursaphelenchus xylophilus
BXY_1057600
I
0.757
GPLIN_001175700
Globodera pallida
GPLIN_001175700
I
0.757
L893_g13285
Steinernema glaseri
L893_g13285
I
0.757
PEQ_0000391501
Parascaris equorum
PEQ_0000391501
I
0.757
scaffold605-EXSNAP2012.9
Pristionchus exspectatus
scaffold605-EXSNAP2012.9
I
0.757
SSTP_0001081300
Strongyloides stercoralis
SSTP_0001081300
I
0.757
TCLT_0000461101
Thelazia callipaeda
TCLT_0000461101
I
0.757
LOAG_08615
Loa loa
LOAG_08615
I
0.756
WBGene00236987
Onchocerca volvulus
WBGene00236987
I
0.756
GPLIN_000337500
Globodera pallida
GPLIN_000337500
I
0.756
Hba_12763
Heterorhabditis bacteriophora
Hba_12763
I
0.756
L596_g11035
Steinernema carpocapsae
L596_g11035
I
0.756
L889_g17247
Steinernema feltiae
L889_g17247
I
0.756
L898_g26357
Steinernema monticolum
L898_g26357
I
0.756
nOo.2.0.1.g02345
Onchocerca ochengi
nOo.2.0.1.g02345
I
0.756
HCOI00673400
Haemonchus contortus
HCOI00673400
I
0.751
HCOI01687000
Haemonchus contortus
HCOI01687000
I
0.751
Hba_12764
Heterorhabditis bacteriophora
Hba_12764
N
0.750
PPA06637
Pristionchus pacificus
PPA06637
I
0.748
scaffold204-EXSNAP2012.8
Pristionchus exspectatus
scaffold204-EXSNAP2012.8
N
0.747