PPA06637 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA06637 T305853_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.935 0.614
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.833 0.543
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.803 0.486
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA06637 Nuclear receptor 27 101

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.989
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.987
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.987
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.971
PPA29597 Pristionchus pacificus PPA29597 I 0.959
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.948
L893_g28857 Steinernema glaseri L893_g28857 I 0.943
L889_g1557 Steinernema feltiae L889_g1557 I 0.940
L898_g9866 Steinernema monticolum L898_g9866 I 0.940
NECAME_08394 Necator americanus NECAME_08394 I 0.940
PPA21777 Pristionchus pacificus PPA21777 I 0.939
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.939
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.939
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.939
CJA00680 Caenorhabditis japonica CJA00680 I 0.938
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.938
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.938
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.938
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.938
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.937
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.937
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.937
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.937
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.937
Bm4980 Brugia malayi Bm4980 I 0.936
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.936
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.936
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.936
CBG03844 Caenorhabditis briggsae CBG03844 I 0.935
CBN18198 Caenorhabditis brenneri CBN18198 I 0.935
CBN20749 Caenorhabditis brenneri CBN20749 I 0.935
CRE08259 Caenorhabditis remanei CRE08259 I 0.935
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.935
ASU_03870 Ascaris suum ASU_03870 I 0.935
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.935
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.935
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.935
LOAG_08615 Loa loa LOAG_08615 I 0.934
CRE00149 Caenorhabditis remanei CRE00149 I 0.925
CBG10855 Caenorhabditis briggsae CBG10855 I 0.924
CBN24827 Caenorhabditis brenneri CBN24827 I 0.924
CJA08896 Caenorhabditis japonica CJA08896 I 0.924
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.924
L892_g4169 Steinernema scapterisci L892_g4169 I 0.924
L893_g3565 Steinernema glaseri L893_g3565 I 0.922
L892_g17612 Steinernema scapterisci L892_g17612 I 0.919
CBG10857 Caenorhabditis briggsae CBG10857 I 0.917
CRE00606 Caenorhabditis remanei CRE00606 I 0.917
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.917
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.916
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.916
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.916
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.916
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.912
L889_g1891 Steinernema feltiae L889_g1891 I 0.909
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.908
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.908
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.908
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.908
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.906
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.905
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.905
L893_g13285 Steinernema glaseri L893_g13285 I 0.904
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.904
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.904
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.904
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.903
L889_g17247 Steinernema feltiae L889_g17247 I 0.903
L898_g26357 Steinernema monticolum L898_g26357 I 0.903
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.903
PPA24481 Pristionchus pacificus PPA24481 I 0.901
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.901
ASU_03657 Ascaris suum ASU_03657 I 0.896
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.896
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.886
L889_g11570 Steinernema feltiae L889_g11570 I 0.886
L893_g21283 Steinernema glaseri L893_g21283 I 0.886
L898_g23058 Steinernema monticolum L898_g23058 I 0.886
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.884
L892_g4134 Steinernema scapterisci L892_g4134 I 0.884
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.883
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.878
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.877
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.877
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.874
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.873
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.868
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.864
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.863
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.863
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.863
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.857
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.857
LOAG_16377 Loa loa LOAG_16377 I 0.855
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.855
ASU_13587 Ascaris suum ASU_13587 I 0.852
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.852
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.852
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.852
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.851
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.851
LOAG_08636 Loa loa LOAG_08636 I 0.850
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.850
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.850
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.850
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.846
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.843
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.843
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.841
NECAME_01944 Necator americanus NECAME_01944 I 0.841
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.839
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.839
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.837
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.835
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.834
CBG01866 Caenorhabditis briggsae CBG01866 I 0.833
CBN19235 Caenorhabditis brenneri CBN19235 I 0.833
CJA13458 Caenorhabditis japonica CJA13458 I 0.833
CRE03310 Caenorhabditis remanei CRE03310 I 0.833
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.833
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.833
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.833
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.833
Minc11307 Meloidogyne incognita Minc11307 I 0.832
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.832
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.832
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.830
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.830
Bm5319 Brugia malayi Bm5319 I 0.828
LOAG_00300 Loa loa LOAG_00300 I 0.828
Minc13747 Meloidogyne incognita Minc13747 I 0.828
Minc17538 Meloidogyne incognita Minc17538 I 0.828
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.828
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.828
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.828
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.828
L889_g29879 Steinernema feltiae L889_g29879 I 0.828
L893_g3010 Steinernema glaseri L893_g3010 I 0.828
L898_g2764 Steinernema monticolum L898_g2764 I 0.828
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.828
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.828
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.828
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.828
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.828
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.824
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.823
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.822
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.822
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.822
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.818
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.818
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.818
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.817
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.817
PPA10975 Pristionchus pacificus PPA10975 N 0.816
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.815
L893_g25227 Steinernema glaseri L893_g25227 I 0.815
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.814
ASU_12501 Ascaris suum ASU_12501 I 0.814
NECAME_00872 Necator americanus NECAME_00872 I 0.814
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.808
L889_g7780 Steinernema feltiae L889_g7780 I 0.808
L892_g8671 Steinernema scapterisci L892_g8671 I 0.808
CBG16594 Caenorhabditis briggsae CBG16594 I 0.806
CBN20518 Caenorhabditis brenneri CBN20518 I 0.806
CRE25378 Caenorhabditis remanei CRE25378 I 0.806
Smp_174700 Schistosoma mansoni Smp_174700 I 0.806
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.806
B_00901 Schistosoma haematobium B_00901 I 0.806
NECAME_11999 Necator americanus NECAME_11999 I 0.806
SROB_0001376101 Schistosoma rodhaini SROB_0001376101 I 0.806
CBG26996 Caenorhabditis briggsae CBG26996 I 0.803
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.803
L898_g22454 Steinernema monticolum L898_g22454 I 0.803
MhA1_Contig70.frz3.gene31 Meloidogyne hapla MhA1_Contig70.frz3.gene31 I 0.800
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.800
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.800
CBN18824 Caenorhabditis brenneri CBN18824 I 0.798
CBN19472 Caenorhabditis brenneri CBN19472 I 0.798
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.797
HCOI00891400 Haemonchus contortus HCOI00891400 I 0.795
PPA22443 Pristionchus pacificus PPA22443 I 0.794
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I 0.794
PTRK_0000038300 Parastrongyloides trichosuri PTRK_0000038300 N 0.786
PTRK_0000861400 Parastrongyloides trichosuri PTRK_0000861400 I 0.783
CBG04204 Caenorhabditis briggsae CBG04204 I 0.782
SPAL_0001213800 Strongyloides papillosus SPAL_0001213800 I 0.782
SVE_0639400 Strongyloides venezuelensis SVE_0639400 I 0.782
CBN29725 Caenorhabditis brenneri CBN29725 I 0.781
CRE27053 Caenorhabditis remanei CRE27053 I 0.781
ANCCAN_08267 Ancylostoma caninum ANCCAN_08267 I 0.778
NBR_0001473401 Nippostrongylus brasiliensis NBR_0001473401 I 0.778
PPA24468 Pristionchus pacificus PPA24468 I 0.773
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.773
scaffold1383-EXSNAP2012.1 Pristionchus exspectatus scaffold1383-EXSNAP2012.1 N 0.773
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.773
ASU_02757 Ascaris suum ASU_02757 N 0.770
CBG09380 Caenorhabditis briggsae CBG09380 I 0.767
CRE26981 Caenorhabditis remanei CRE26981 I 0.766
PTRK_0000862000 Parastrongyloides trichosuri PTRK_0000862000 I 0.765
SSTP_0001140400 Strongyloides stercoralis SSTP_0001140400 I 0.765
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.760
CBN23409 Caenorhabditis brenneri CBN23409 I 0.759
CBN28056 Caenorhabditis brenneri CBN28056 I 0.759
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.758
CRE30089 Caenorhabditis remanei CRE30089 I 0.755
CJA14829 Caenorhabditis japonica CJA14829 I 0.753
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.752
CBN11572 Caenorhabditis brenneri CBN11572 I 0.751
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.751
ASIM_0001848201 Anisakis simplex ASIM_0001848201 N 0.751
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.751
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.751
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.751
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.748
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.748
tetur01g10970 Tetranychus urticae tetur01g10970 I 0.745