CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold92-EXSNAP2012.31
(
Pristionchus exspectatus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
scaffold92-EXSNAP2012.31
T310340_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold92-EXSNAP2012.31
Nuclear receptor
21
91
AKCVICGDAATGYHYQTASCNGCKAFFRRTVLAMRLFPPCPTDGGCQLDQSKAKPCRACRFARCVEGGMNP
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus exspectatus
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold426-EXSNAP2012.35
Pristionchus exspectatus
scaffold426-EXSNAP2012.35
I
0.923
WBGene00240403
Onchocerca volvulus
WBGene00240403
I
0.898
PPA27013
Pristionchus pacificus
PPA27013
N
0.893
PPA27011
Pristionchus pacificus
PPA27011
N
0.888
ASIM_0001569801
Anisakis simplex
ASIM_0001569801
I
0.887
ASU_03657
Ascaris suum
ASU_03657
I
0.887
PEQ_0000722401
Parascaris equorum
PEQ_0000722401
I
0.887
EEL_0000989101
Elaeophora elaphi
EEL_0000989101
I
0.881
LOAG_16377
Loa loa
LOAG_16377
I
0.878
BTMF_0000941401
Brugia timori
BTMF_0000941401
I
0.878
PPA29597
Pristionchus pacificus
PPA29597
I
0.876
L892_g4169
Steinernema scapterisci
L892_g4169
I
0.876
L893_g28857
Steinernema glaseri
L893_g28857
I
0.876
scaffold552-EXSNAP2012.18
Pristionchus exspectatus
scaffold552-EXSNAP2012.18
I
0.871
HCOI01292200
Haemonchus contortus
HCOI01292200
I
0.861
CBG10857
Caenorhabditis briggsae
CBG10857
I
0.860
CJA00680
Caenorhabditis japonica
CJA00680
I
0.860
CRE00606
Caenorhabditis remanei
CRE00606
I
0.860
nhr-173
Caenorhabditis elegans
WBGene00016975
I
0.860
HPLM_0000769401
Haemonchus placei
HPLM_0000769401
I
0.859
L889_g1557
Steinernema feltiae
L889_g1557
I
0.858
L898_g9866
Steinernema monticolum
L898_g9866
I
0.858
scaffold43-EXSNAP2012.41
Pristionchus exspectatus
scaffold43-EXSNAP2012.41
I
0.854
CBN24827
Caenorhabditis brenneri
CBN24827
I
0.846
L596_g27472
Steinernema carpocapsae
L596_g27472
I
0.846
CBG10855
Caenorhabditis briggsae
CBG10855
I
0.845
CJA08896
Caenorhabditis japonica
CJA08896
I
0.845
CRE00149
Caenorhabditis remanei
CRE00149
I
0.845
nhr-120
Caenorhabditis elegans
WBGene00003710
I
0.845
scaffold598-EXSNAP2012.5
Pristionchus exspectatus
scaffold598-EXSNAP2012.5
I
0.845
PPA24481
Pristionchus pacificus
PPA24481
I
0.840
scaffold552-EXSNAP2012.17
Pristionchus exspectatus
scaffold552-EXSNAP2012.17
I
0.840
PPA06637
Pristionchus pacificus
PPA06637
I
0.839
NECAME_08394
Necator americanus
NECAME_08394
I
0.838
L893_g3565
Steinernema glaseri
L893_g3565
I
0.833
L892_g17612
Steinernema scapterisci
L892_g17612
I
0.830
scaffold251-EXSNAP2012.44
Pristionchus exspectatus
scaffold251-EXSNAP2012.44
I
0.829
scaffold826-EXSNAP2012.10
Pristionchus exspectatus
scaffold826-EXSNAP2012.10
I
0.829
NECAME_01944
Necator americanus
NECAME_01944
I
0.826
HPBE_0001246601
Heligmosomoides bakeri
HPBE_0001246601
I
0.825
PPA21777
Pristionchus pacificus
PPA21777
I
0.824
ANCCEY_01254
Ancylostoma ceylanicum
ANCCEY_01254
I
0.820
HCOI01525900
Haemonchus contortus
HCOI01525900
I
0.820
PPA27012
Pristionchus pacificus
PPA27012
N
0.812
ANCCAN_09880
Ancylostoma caninum
ANCCAN_09880
I
0.809
L889_g1891
Steinernema feltiae
L889_g1891
I
0.809
HPBE_0000704501
Heligmosomoides bakeri
HPBE_0000704501
I
0.786
EVEC_0001313601
Enterobius vermicularis
EVEC_0001313601
I
0.774
Ppa-nhr-120
Pristionchus pacificus
PPA00183
I
0.770
scaffold384-EXSNAP2012.4
Pristionchus exspectatus
scaffold384-EXSNAP2012.4
I
0.770
scaffold572-EXSNAP2012.7
Pristionchus exspectatus
scaffold572-EXSNAP2012.7
I
0.770
ACAC_0001297301
Angiostrongylus cantonensis
ACAC_0001297301
I
0.769
nhr-136
Caenorhabditis elegans
WBGene00003726
I
0.762
SSTP_0000546600
Strongyloides stercoralis
SSTP_0000546600
I
0.758
PPA24468
Pristionchus pacificus
PPA24468
I
0.750
scaffold265-EXSNAP2012.2
Pristionchus exspectatus
scaffold265-EXSNAP2012.2
I
0.750
BXY_1375200
Bursaphelenchus xylophilus
BXY_1375200
I
0.748
L889_g11570
Steinernema feltiae
L889_g11570
I
0.746
L893_g21283
Steinernema glaseri
L893_g21283
I
0.746
L898_g23058
Steinernema monticolum
L898_g23058
I
0.746