SMUV_0001072301 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0001072301 T310438_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.786 0.492
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0001072301-mRNA-1 Nuclear receptor 28 92

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.902
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.898
NECAME_01944 Necator americanus NECAME_01944 I 0.898
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.896
L893_g28857 Steinernema glaseri L893_g28857 I 0.896
ALUE_0001920701 Ascaris lumbricoides ALUE_0001920701 N 0.892
NECAME_08394 Necator americanus NECAME_08394 I 0.892
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.883
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.883
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.883
L889_g1557 Steinernema feltiae L889_g1557 I 0.881
L898_g9866 Steinernema monticolum L898_g9866 I 0.881
CJA00680 Caenorhabditis japonica CJA00680 I 0.878
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.878
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.876
PPA21777 Pristionchus pacificus PPA21777 I 0.875
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.873
PPA06637 Pristionchus pacificus PPA06637 I 0.868
PPA29597 Pristionchus pacificus PPA29597 I 0.868
L892_g4169 Steinernema scapterisci L892_g4169 I 0.863
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.861
CBN24827 Caenorhabditis brenneri CBN24827 I 0.859
CBG10855 Caenorhabditis briggsae CBG10855 I 0.858
CJA08896 Caenorhabditis japonica CJA08896 I 0.858
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.858
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.858
CRE00149 Caenorhabditis remanei CRE00149 I 0.848
L892_g17612 Steinernema scapterisci L892_g17612 I 0.847
L893_g3565 Steinernema glaseri L893_g3565 I 0.847
L889_g1891 Steinernema feltiae L889_g1891 I 0.844
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.841
CBG10857 Caenorhabditis briggsae CBG10857 I 0.840
CRE00606 Caenorhabditis remanei CRE00606 I 0.840
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.840
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.832
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.831
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.827
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.827
PPA24481 Pristionchus pacificus PPA24481 I 0.822
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.822
ASU_03657 Ascaris suum ASU_03657 I 0.811
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.811
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.810
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.810
LOAG_16377 Loa loa LOAG_16377 I 0.802
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.802
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.799
ASU_02755 Ascaris suum ASU_02755 I 0.791
CBG26996 Caenorhabditis briggsae CBG26996 I 0.786
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.786
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.779
CBN29725 Caenorhabditis brenneri CBN29725 I 0.776
CRE27053 Caenorhabditis remanei CRE27053 I 0.776
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.766