CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DME_0000747901
(
Dracunculus medinensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
DME_0000747901
T308524_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.924
0.600
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.812
0.486
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
DME_0000747901-mRNA-1
Nuclear receptor
1
70
LLCIVCGDQATGRHYGTIACNGCKGFFRRTIRRSYKYTCRFSNSCNIDKHNRAVCRACRFMRCINAGMKV
Links
Other
Nuclear receptor
family TFs
Other
Dracunculus medinensis
TFs
250 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_13587
Ascaris suum
ASU_13587
I
0.992
LOAG_08636
Loa loa
LOAG_08636
I
0.991
WBGene00240560
Onchocerca volvulus
WBGene00240560
I
0.991
EEL_0000204901
Elaeophora elaphi
EEL_0000204901
I
0.991
nAv.1.0.1.g09196
Acanthocheilonema viteae
nAv.1.0.1.g09196
I
0.991
nDi.2.2.2.g09348
Dirofilaria immitis
nDi.2.2.2.g09348
I
0.991
nOo.2.0.1.g03859
Onchocerca ochengi
nOo.2.0.1.g03859
I
0.991
TCLT_0000612301
Thelazia callipaeda
TCLT_0000612301
I
0.991
nLs.2.1.2.g04051
Litomosoides sigmodontis
nLs.2.1.2.g04051
I
0.989
BXY_1375200
Bursaphelenchus xylophilus
BXY_1375200
I
0.983
Minc13747
Meloidogyne incognita
Minc13747
I
0.982
Minc17538
Meloidogyne incognita
Minc17538
I
0.982
GPLIN_000284100
Globodera pallida
GPLIN_000284100
I
0.982
MhA1_Contig817.frz3.gene1
Meloidogyne hapla
MhA1_Contig817.frz3.gene1
I
0.982
PPA22443
Pristionchus pacificus
PPA22443
I
0.980
scaffold107-EXSNAP2012.33
Pristionchus exspectatus
scaffold107-EXSNAP2012.33
I
0.980
L596_g23123
Steinernema carpocapsae
L596_g23123
I
0.979
L889_g11570
Steinernema feltiae
L889_g11570
I
0.978
L892_g4134
Steinernema scapterisci
L892_g4134
I
0.978
L893_g21283
Steinernema glaseri
L893_g21283
I
0.978
L898_g23058
Steinernema monticolum
L898_g23058
I
0.978
CBN11572
Caenorhabditis brenneri
CBN11572
I
0.973
nhr-35
Caenorhabditis elegans
WBGene00003628
I
0.973
CBG14485
Caenorhabditis briggsae
CBG14485
I
0.972
CJA16040
Caenorhabditis japonica
CJA16040
I
0.972
CRE00809
Caenorhabditis remanei
CRE00809
I
0.972
HCOI00592600
Haemonchus contortus
HCOI00592600
I
0.970
OESDEN_04341
Oesophagostomum dentatum
OESDEN_04341
I
0.970
ACAC_0000711701
Angiostrongylus cantonensis
ACAC_0000711701
I
0.925
DICVIV_00957
Dictyocaulus viviparus
DICVIV_00957
I
0.925
HCOI00618700
Haemonchus contortus
HCOI00618700
I
0.925
TCLT_0000461101
Thelazia callipaeda
TCLT_0000461101
I
0.925
CBG03844
Caenorhabditis briggsae
CBG03844
I
0.924
CBN18198
Caenorhabditis brenneri
CBN18198
I
0.924
CBN20749
Caenorhabditis brenneri
CBN20749
I
0.924
CRE08259
Caenorhabditis remanei
CRE08259
I
0.924
LOAG_08615
Loa loa
LOAG_08615
I
0.924
nhr-49
Caenorhabditis elegans
WBGene00003639
D
0.924
ASIM_0001848201
Anisakis simplex
ASIM_0001848201
N
0.924
ASU_03870
Ascaris suum
ASU_03870
I
0.924
GPLIN_001175700
Globodera pallida
GPLIN_001175700
I
0.924
PEQ_0000391501
Parascaris equorum
PEQ_0000391501
I
0.924
scaffold605-EXSNAP2012.9
Pristionchus exspectatus
scaffold605-EXSNAP2012.9
I
0.924
WBGene00236987
Onchocerca volvulus
WBGene00236987
I
0.920
BXY_1057600
Bursaphelenchus xylophilus
BXY_1057600
I
0.920
nOo.2.0.1.g02345
Onchocerca ochengi
nOo.2.0.1.g02345
I
0.920
DME_0000591901
Dracunculus medinensis
DME_0000591901
I
0.919
L596_g11035
Steinernema carpocapsae
L596_g11035
I
0.917
L889_g17247
Steinernema feltiae
L889_g17247
I
0.917
L893_g13285
Steinernema glaseri
L893_g13285
I
0.917
L898_g26357
Steinernema monticolum
L898_g26357
I
0.917
RSKR_0001067400
Rhabditophanes kr3021
RSKR_0001067400
I
0.916
Bm4980
Brugia malayi
Bm4980
I
0.915
BTMF_0000217201
Brugia timori
BTMF_0000217201
I
0.915
PTRK_0000720500
Parastrongyloides trichosuri
PTRK_0000720500
I
0.913
SPAL_0000841700
Strongyloides papillosus
SPAL_0000841700
I
0.913
SSTP_0000145700
Strongyloides stercoralis
SSTP_0000145700
I
0.913
SVE_1799100
Strongyloides venezuelensis
SVE_1799100
I
0.913
WUBG_17449
Wuchereria bancrofti
WUBG_17449
N
0.904
PTRK_0001020800
Parastrongyloides trichosuri
PTRK_0001020800
I
0.901
SPAL_0001099500
Strongyloides papillosus
SPAL_0001099500
I
0.901
SSTP_0000769100
Strongyloides stercoralis
SSTP_0000769100
I
0.901
SVE_0858700
Strongyloides venezuelensis
SVE_0858700
I
0.901
scaffold598-EXSNAP2012.5
Pristionchus exspectatus
scaffold598-EXSNAP2012.5
I
0.882
SPAL_0001637600
Strongyloides papillosus
SPAL_0001637600
I
0.880
SSTP_0000055100
Strongyloides stercoralis
SSTP_0000055100
I
0.880
SVE_0429000
Strongyloides venezuelensis
SVE_0429000
I
0.880
PTRK_0000994100
Parastrongyloides trichosuri
PTRK_0000994100
I
0.878
scaffold251-EXSNAP2012.44
Pristionchus exspectatus
scaffold251-EXSNAP2012.44
I
0.878
scaffold826-EXSNAP2012.10
Pristionchus exspectatus
scaffold826-EXSNAP2012.10
I
0.878
PPA06637
Pristionchus pacificus
PPA06637
I
0.877
ASU_03657
Ascaris suum
ASU_03657
I
0.876
PEQ_0000722401
Parascaris equorum
PEQ_0000722401
I
0.876
GPLIN_000337500
Globodera pallida
GPLIN_000337500
I
0.872
BXY_0599800
Bursaphelenchus xylophilus
BXY_0599800
I
0.870
SPAL_0001238400
Strongyloides papillosus
SPAL_0001238400
I
0.868
SVE_0697700
Strongyloides venezuelensis
SVE_0697700
I
0.868
NECAME_11999
Necator americanus
NECAME_11999
I
0.867
PTRK_0000480700
Parastrongyloides trichosuri
PTRK_0000480700
I
0.867
SPAL_0001712900
Strongyloides papillosus
SPAL_0001712900
I
0.867
SSTP_0001253400
Strongyloides stercoralis
SSTP_0001253400
I
0.867
SVE_0146100
Strongyloides venezuelensis
SVE_0146100
I
0.867
HCOI00891400
Haemonchus contortus
HCOI00891400
I
0.863
BXY_0631600
Bursaphelenchus xylophilus
BXY_0631600
I
0.860
MhA1_Contig691.frz3.gene13
Meloidogyne hapla
MhA1_Contig691.frz3.gene13
I
0.858
ASIM_0001423201
Anisakis simplex
ASIM_0001423201
I
0.856
L889_g1557
Steinernema feltiae
L889_g1557
I
0.856
Minc11307
Meloidogyne incognita
Minc11307
I
0.855
PPA29597
Pristionchus pacificus
PPA29597
I
0.853
L898_g9866
Steinernema monticolum
L898_g9866
I
0.853
CBN18824
Caenorhabditis brenneri
CBN18824
I
0.852
CBN19472
Caenorhabditis brenneri
CBN19472
I
0.852
nRc.2.0.1.g16639
Romanomermis culicivorax
nRc.2.0.1.g16639
I
0.852
ALUE_0000387101
Ascaris lumbricoides
ALUE_0000387101
I
0.851
ANCCAN_08267
Ancylostoma caninum
ANCCAN_08267
I
0.851
ASU_00859
Ascaris suum
ASU_00859
I
0.851
MhA1_Contig2491.frz3.gene4
Meloidogyne hapla
MhA1_Contig2491.frz3.gene4
I
0.851
NBR_0001473401
Nippostrongylus brasiliensis
NBR_0001473401
I
0.851
RSKR_0000342500
Rhabditophanes kr3021
RSKR_0000342500
I
0.851
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0
I
0.847
L892_g4169
Steinernema scapterisci
L892_g4169
I
0.847
L893_g28857
Steinernema glaseri
L893_g28857
I
0.847
SSTP_0001170700
Strongyloides stercoralis
SSTP_0001170700
I
0.842
MhA1_Contig70.frz3.gene31
Meloidogyne hapla
MhA1_Contig70.frz3.gene31
I
0.839
PTRK_0000861400
Parastrongyloides trichosuri
PTRK_0000861400
I
0.839
CRE25378
Caenorhabditis remanei
CRE25378
I
0.838
L889_g17254
Steinernema feltiae
L889_g17254
I
0.838
L898_g7537
Steinernema monticolum
L898_g7537
I
0.838
nhr-10
Caenorhabditis elegans
WBGene00003609
I
0.837
CBG04204
Caenorhabditis briggsae
CBG04204
I
0.836
CBG16594
Caenorhabditis briggsae
CBG16594
I
0.836
CBN20518
Caenorhabditis brenneri
CBN20518
I
0.836
SMUV_0000708401
Syphacia muris
SMUV_0000708401
I
0.836
scaffold43-EXSNAP2012.41
Pristionchus exspectatus
scaffold43-EXSNAP2012.41
I
0.834
SMUV_0000369301
Syphacia muris
SMUV_0000369301
I
0.834
L596_g12321
Steinernema carpocapsae
L596_g12321
I
0.833
L889_g29879
Steinernema feltiae
L889_g29879
I
0.833
L893_g3010
Steinernema glaseri
L893_g3010
I
0.833
L898_g2764
Steinernema monticolum
L898_g2764
I
0.833
EVEC_0000027301
Enterobius vermicularis
EVEC_0000027301
I
0.832
HPLM_0000769401
Haemonchus placei
HPLM_0000769401
I
0.832
L596_g11029
Steinernema carpocapsae
L596_g11029
I
0.832
L892_g1520
Steinernema scapterisci
L892_g1520
I
0.832
SBAD_0000391501
Soboliphyme baturini
SBAD_0000391501
I
0.832
Bm5319
Brugia malayi
Bm5319
I
0.831
LOAG_00300
Loa loa
LOAG_00300
I
0.831
BTMF_0001388101
Brugia timori
BTMF_0001388101
I
0.831
DME_0000693601
Dracunculus medinensis
DME_0000693601
I
0.831
nDi.2.2.2.g02318
Dirofilaria immitis
nDi.2.2.2.g02318
I
0.831
nOo.2.0.1.g01530
Onchocerca ochengi
nOo.2.0.1.g01530
I
0.831
OFLC_0001450101
Onchocerca flexuosa
OFLC_0001450101
I
0.831
TCLT_0000399401
Thelazia callipaeda
TCLT_0000399401
I
0.831
Minc02318
Meloidogyne incognita
Minc02318
I
0.830
Minc05752
Meloidogyne incognita
Minc05752
I
0.830
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0
I
0.830
L892_g17612
Steinernema scapterisci
L892_g17612
I
0.830
SPAL_0001213800
Strongyloides papillosus
SPAL_0001213800
I
0.829
SVE_0639400
Strongyloides venezuelensis
SVE_0639400
I
0.829
CJA14599
Caenorhabditis japonica
CJA14599
I
0.826
HCOI00601000
Haemonchus contortus
HCOI00601000
I
0.825
HCOI01292200
Haemonchus contortus
HCOI01292200
I
0.825
HPLM_0000564201
Haemonchus placei
HPLM_0000564201
I
0.825
CBG03848
Caenorhabditis briggsae
CBG03848
I
0.824
CBN11344
Caenorhabditis brenneri
CBN11344
I
0.824
CBN14643
Caenorhabditis brenneri
CBN14643
I
0.824
CRE08089
Caenorhabditis remanei
CRE08089
I
0.824
nhr-69
Caenorhabditis elegans
WBGene00003659
I
0.824
nhr-64
Caenorhabditis elegans
WBGene00003654
I
0.822
ASIM_0001569801
Anisakis simplex
ASIM_0001569801
I
0.822
EVEC_0001195701
Enterobius vermicularis
EVEC_0001195701
I
0.821
L893_g3565
Steinernema glaseri
L893_g3565
I
0.820
NECAME_08394
Necator americanus
NECAME_08394
I
0.820
PTRK_0001312000
Parastrongyloides trichosuri
PTRK_0001312000
I
0.819
SSTP_0000546600
Strongyloides stercoralis
SSTP_0000546600
I
0.819
WBGene00241993
Onchocerca volvulus
WBGene00241993
I
0.818
CRE30089
Caenorhabditis remanei
CRE30089
I
0.815
L596_g27472
Steinernema carpocapsae
L596_g27472
I
0.815
PTRK_0000862000
Parastrongyloides trichosuri
PTRK_0000862000
I
0.815
SSTP_0001140400
Strongyloides stercoralis
SSTP_0001140400
I
0.815
ANCCAN_14103
Ancylostoma caninum
ANCCAN_14103
I
0.814
ANCCAN_17081
Ancylostoma caninum
ANCCAN_17081
I
0.814
SPAL_0000490500
Strongyloides papillosus
SPAL_0000490500
I
0.814
SVE_1951500
Strongyloides venezuelensis
SVE_1951500
I
0.814
PPA21777
Pristionchus pacificus
PPA21777
I
0.813
L596_g23777
Steinernema carpocapsae
L596_g23777
I
0.813
L893_g25227
Steinernema glaseri
L893_g25227
I
0.813
nRc.2.0.1.g00257
Romanomermis culicivorax
nRc.2.0.1.g00257
I
0.813
CBG01866
Caenorhabditis briggsae
CBG01866
I
0.812
CBN19235
Caenorhabditis brenneri
CBN19235
I
0.812
CJA13458
Caenorhabditis japonica
CJA13458
I
0.812
CRE03310
Caenorhabditis remanei
CRE03310
I
0.812
nhr-1
Caenorhabditis elegans
WBGene00003600
D
0.812
ALUE_0002179401
Ascaris lumbricoides
ALUE_0002179401
I
0.812
ANCCEY_01961
Ancylostoma ceylanicum
ANCCEY_01961
I
0.812
ASU_12501
Ascaris suum
ASU_12501
I
0.812
HCOI01554200
Haemonchus contortus
HCOI01554200
I
0.812
HPBE_0000837301
Heligmosomoides bakeri
HPBE_0000837301
I
0.812
L898_g22454
Steinernema monticolum
L898_g22454
I
0.812
NECAME_00872
Necator americanus
NECAME_00872
I
0.812
CBG10857
Caenorhabditis briggsae
CBG10857
I
0.811
CJA00680
Caenorhabditis japonica
CJA00680
I
0.811
CRE00606
Caenorhabditis remanei
CRE00606
I
0.811
EFV54558
Trichinella spiralis
EFV54558
I
0.811
nhr-173
Caenorhabditis elegans
WBGene00016975
I
0.811
D917_06779
Trichinella nativa
D917_06779
I
0.811
BXY_1057700
Bursaphelenchus xylophilus
BXY_1057700
I
0.809
scaffold426-EXSNAP2012.35
Pristionchus exspectatus
scaffold426-EXSNAP2012.35
I
0.808
CRE00149
Caenorhabditis remanei
CRE00149
I
0.807
EVEC_0001313601
Enterobius vermicularis
EVEC_0001313601
I
0.807
L596_g12276
Steinernema carpocapsae
L596_g12276
I
0.806
L889_g7780
Steinernema feltiae
L889_g7780
I
0.806
L892_g8671
Steinernema scapterisci
L892_g8671
I
0.806
ACOC_0000700901
Angiostrongylus costaricensis
ACOC_0000700901
I
0.805
DICVIV_09815
Dictyocaulus viviparus
DICVIV_09815
I
0.805
scaffold1039-EXSNAP2012.5
Pristionchus exspectatus
scaffold1039-EXSNAP2012.5
I
0.802
TMUE_s0002006800
Trichuris muris
TMUE_s0002006800
I
0.799
CBN24827
Caenorhabditis brenneri
CBN24827
I
0.796
CBG10855
Caenorhabditis briggsae
CBG10855
I
0.794
CJA08896
Caenorhabditis japonica
CJA08896
I
0.794
nhr-120
Caenorhabditis elegans
WBGene00003710
I
0.794
CBG03860
Caenorhabditis briggsae
CBG03860
I
0.791
CBN05776
Caenorhabditis brenneri
CBN05776
I
0.791
CJA19445
Caenorhabditis japonica
CJA19445
I
0.791
CRE08264
Caenorhabditis remanei
CRE08264
I
0.791
nhr-62
Caenorhabditis elegans
WBGene00003652
I
0.791
Hba_17038
Heterorhabditis bacteriophora
Hba_17038
I
0.791
HCOI01945300
Haemonchus contortus
HCOI01945300
I
0.791
HCOI02126500
Haemonchus contortus
HCOI02126500
I
0.791
HPBE_0001438801
Heligmosomoides bakeri
HPBE_0001438801
I
0.791
HPLM_0001358001
Haemonchus placei
HPLM_0001358001
I
0.791
L596_g11032
Steinernema carpocapsae
L596_g11032
I
0.791
L892_g1523
Steinernema scapterisci
L892_g1523
I
0.791
scaffold552-EXSNAP2012.18
Pristionchus exspectatus
scaffold552-EXSNAP2012.18
I
0.785
LOAG_16377
Loa loa
LOAG_16377
I
0.779
BTMF_0000941401
Brugia timori
BTMF_0000941401
I
0.779
EEL_0000989101
Elaeophora elaphi
EEL_0000989101
I
0.776
EVEC_0000506001
Enterobius vermicularis
EVEC_0000506001
N
0.775
WBGene00240403
Onchocerca volvulus
WBGene00240403
I
0.773
L889_g1891
Steinernema feltiae
L889_g1891
I
0.771
ACAC_0001297301
Angiostrongylus cantonensis
ACAC_0001297301
I
0.766
ENSLOCG00000013459
Lepisosteus oculatus
ENSLOCG00000013459
I
0.758
ANCCAN_07383
Ancylostoma caninum
ANCCAN_07383
I
0.758
HCOI00106000
Haemonchus contortus
HCOI00106000
I
0.758
HPBE_0000460501
Heligmosomoides bakeri
HPBE_0000460501
I
0.758
NBR_0001253301
Nippostrongylus brasiliensis
NBR_0001253301
I
0.758
NECAME_12245
Necator americanus
NECAME_12245
I
0.758
TELCIR_10098
Teladorsagia circumcincta
TELCIR_10098
I
0.758
ANCCEY_01254
Ancylostoma ceylanicum
ANCCEY_01254
I
0.757
Ppa-nhr-3
Pristionchus pacificus
PPA28597
I
0.750
scaffold395-EXSNAP2012.23
Pristionchus exspectatus
scaffold395-EXSNAP2012.23
I
0.750
Bm5457
Brugia malayi
Bm5457
I
0.749
CBG22776
Caenorhabditis briggsae
CBG22776
I
0.749
CBN08474
Caenorhabditis brenneri
CBN08474
I
0.749
CJA14035
Caenorhabditis japonica
CJA14035
I
0.749
CRE21925
Caenorhabditis remanei
CRE21925
I
0.749
LOAG_07549
Loa loa
LOAG_07549
I
0.749
nhr-14
Caenorhabditis elegans
WBGene00003613
I
0.749
WBGene00239376
Onchocerca volvulus
WBGene00239376
I
0.749
ASIM_0001548701
Anisakis simplex
ASIM_0001548701
I
0.749
BTMF_0001565301
Brugia timori
BTMF_0001565301
I
0.749
EEL_0000265301
Elaeophora elaphi
EEL_0000265301
I
0.749
nAv.1.0.1.g08447
Acanthocheilonema viteae
nAv.1.0.1.g08447
I
0.749
nDi.2.2.2.g03974
Dirofilaria immitis
nDi.2.2.2.g03974
I
0.749
nLs.2.1.2.g04526
Litomosoides sigmodontis
nLs.2.1.2.g04526
I
0.749
nOo.2.0.1.g02628
Onchocerca ochengi
nOo.2.0.1.g02628
I
0.749
OFLC_0000076301
Onchocerca flexuosa
OFLC_0000076301
I
0.749
SMUV_0000835401
Syphacia muris
SMUV_0000835401
I
0.749
TCLT_0000342401
Thelazia callipaeda
TCLT_0000342401
I
0.749
TCNE_0000582701
Toxocara canis
TCNE_0000582701
I
0.749
GB45602
Apis mellifera
GB45602
I
0.745