nhr-153 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00007546 T306256_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Involved in response to starvation and short-term memory. Predicted to be located in nucleus. Is expressed in intestine; neurons; pharynx; and rectum. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.974 0.714
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.973 0.714
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
C13C4.1 Nuclear receptor 27 100

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN28791 Caenorhabditis brenneri CBN28791 I 0.992
CBG23381 Caenorhabditis briggsae CBG23381 I 0.992
CRE27052 Caenorhabditis remanei CRE27052 I 0.991
CJA03696 Caenorhabditis japonica CJA03696 I 0.986
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.974
CRE27050 Caenorhabditis remanei CRE27050 I 0.973
CBN28497 Caenorhabditis brenneri CBN28497 I 0.973
CBG23380 Caenorhabditis briggsae CBG23380 D 0.973
CRE27051 Caenorhabditis remanei CRE27051 I 0.938
nhr-208 Caenorhabditis elegans WBGene00011099 I 0.913
CRE27053 Caenorhabditis remanei CRE27053 I 0.890
CBN29725 Caenorhabditis brenneri CBN29725 I 0.890
nhr-206 Caenorhabditis elegans WBGene00011097 I 0.882
L893_g28857 Steinernema glaseri L893_g28857 I 0.847
L898_g9866 Steinernema monticolum L898_g9866 I 0.840
L889_g1557 Steinernema feltiae L889_g1557 I 0.840
CBG23379 Caenorhabditis briggsae CBG23379 I 0.835
L892_g4169 Steinernema scapterisci L892_g4169 I 0.833
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.830
nhr-207 Caenorhabditis elegans WBGene00011098 I 0.829
NECAME_08394 Necator americanus NECAME_08394 I 0.828
CBN24827 Caenorhabditis brenneri CBN24827 I 0.825
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.825
CBG10855 Caenorhabditis briggsae CBG10855 I 0.825
CJA08896 Caenorhabditis japonica CJA08896 I 0.825
PPA21777 Pristionchus pacificus PPA21777 I 0.813
CRE00149 Caenorhabditis remanei CRE00149 I 0.806
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.803
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.802
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.799
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.798
ASU_03657 Ascaris suum ASU_03657 I 0.797
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.797
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.796
NECAME_01944 Necator americanus NECAME_01944 I 0.794
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.793
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.790
PPA24481 Pristionchus pacificus PPA24481 I 0.790
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.789
PPA29597 Pristionchus pacificus PPA29597 I 0.785
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.782
L893_g3565 Steinernema glaseri L893_g3565 I 0.780
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.779
LOAG_16377 Loa loa LOAG_16377 I 0.779
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.779
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.779
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.779
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.777
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.776
L892_g17612 Steinernema scapterisci L892_g17612 I 0.774
CJA00680 Caenorhabditis japonica CJA00680 I 0.755
nhr-209 Caenorhabditis elegans WBGene00011100 I 0.751
Minc11307 Meloidogyne incognita Minc11307 I 0.748
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.747
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.745