CBG23380 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG23380 T301622_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG23380
M01296_2.00		 Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.990 0.928
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01296_2.00 Nuclear receptor 51 124

DNA Binding Domains

Protein ID Domain From To Sequence
CBG23380 Nuclear receptor 80 153

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN28497 Caenorhabditis brenneri CBN28497 I 0.991
CRE27050 Caenorhabditis remanei CRE27050 I 0.991
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.990
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.973
CBG23381 Caenorhabditis briggsae CBG23381 I 0.972
CBN28791 Caenorhabditis brenneri CBN28791 I 0.972
CRE27052 Caenorhabditis remanei CRE27052 I 0.971
CJA03696 Caenorhabditis japonica CJA03696 I 0.952
nhr-208 Caenorhabditis elegans WBGene00011099 I 0.916
CRE27051 Caenorhabditis remanei CRE27051 I 0.907
nhr-206 Caenorhabditis elegans WBGene00011097 I 0.893
L893_g28857 Steinernema glaseri L893_g28857 I 0.890
L889_g1557 Steinernema feltiae L889_g1557 I 0.885
L898_g9866 Steinernema monticolum L898_g9866 I 0.885
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.882
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.881
L892_g4169 Steinernema scapterisci L892_g4169 I 0.880
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.866
NECAME_08394 Necator americanus NECAME_08394 I 0.862
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.857
PPA21777 Pristionchus pacificus PPA21777 I 0.856
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.854
CBN29725 Caenorhabditis brenneri CBN29725 I 0.852
CRE27053 Caenorhabditis remanei CRE27053 I 0.852
CBN24827 Caenorhabditis brenneri CBN24827 I 0.846
CBG10855 Caenorhabditis briggsae CBG10855 I 0.844
CJA08896 Caenorhabditis japonica CJA08896 I 0.844
CRE00149 Caenorhabditis remanei CRE00149 I 0.844
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.844
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.843
ASU_03657 Ascaris suum ASU_03657 I 0.837
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.837
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.826
PPA29597 Pristionchus pacificus PPA29597 I 0.824
CJA41479 Caenorhabditis japonica CJA41479 I 0.823
nhr-207 Caenorhabditis elegans WBGene00011098 I 0.822
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.822
ASU_02755 Ascaris suum ASU_02755 I 0.819
L893_g3565 Steinernema glaseri L893_g3565 I 0.819
L892_g17612 Steinernema scapterisci L892_g17612 I 0.818
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.812
PPA24481 Pristionchus pacificus PPA24481 I 0.809
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.809
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.808
nhr-209 Caenorhabditis elegans WBGene00011100 I 0.807
CBG23379 Caenorhabditis briggsae CBG23379 I 0.805
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.804
L889_g1891 Steinernema feltiae L889_g1891 I 0.799
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.797
NECAME_01944 Necator americanus NECAME_01944 I 0.797
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.794
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.794
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.794
LOAG_16377 Loa loa LOAG_16377 I 0.791
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.791
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.791
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.788
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.775
L893_g7217 Steinernema glaseri L893_g7217 I 0.773
L889_g27850 Steinernema feltiae L889_g27850 I 0.769
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.768
CJA00680 Caenorhabditis japonica CJA00680 I 0.764
L596_g27485 Steinernema carpocapsae L596_g27485 I 0.762
L892_g17994 Steinernema scapterisci L892_g17994 I 0.762
Minc11307 Meloidogyne incognita Minc11307 I 0.760
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.755