CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold178-EXSNAP2012.20
(
Pristionchus exspectatus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
scaffold178-EXSNAP2012.20
T310200_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold178-EXSNAP2012.20
Nuclear receptor
44
115
NTCAVCGDKAAGYHYDIGSCSGCKTFFRRTIQTERRFFCRYNGACKESINKEDRVRCRACRFDRCVDVGMNP
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus exspectatus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NECAME_08394
Necator americanus
NECAME_08394
I
0.820
L893_g28857
Steinernema glaseri
L893_g28857
I
0.810
L889_g1557
Steinernema feltiae
L889_g1557
I
0.802
L898_g9866
Steinernema monticolum
L898_g9866
I
0.802
HCOI01292200
Haemonchus contortus
HCOI01292200
I
0.798
HPLM_0000769401
Haemonchus placei
HPLM_0000769401
I
0.796
RSKR_0001067400
Rhabditophanes kr3021
RSKR_0001067400
I
0.787
scaffold43-EXSNAP2012.41
Pristionchus exspectatus
scaffold43-EXSNAP2012.41
I
0.781
BXY_0791000
Bursaphelenchus xylophilus
BXY_0791000
I
0.772
PPA21777
Pristionchus pacificus
PPA21777
I
0.762
CBN24827
Caenorhabditis brenneri
CBN24827
I
0.757
L892_g4169
Steinernema scapterisci
L892_g4169
I
0.756
PPA02306
Pristionchus pacificus
PPA02306
I
0.754
scaffold180-EXSNAP2012.20
Pristionchus exspectatus
scaffold180-EXSNAP2012.20
I
0.754
CBG10855
Caenorhabditis briggsae
CBG10855
I
0.753
CJA08896
Caenorhabditis japonica
CJA08896
I
0.753
nhr-120
Caenorhabditis elegans
WBGene00003710
I
0.753