CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BXY_0791000
(
Bursaphelenchus xylophilus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
BXY_0791000
T308303_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-34
M00690_2.00
Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN
PBM
Narasimhan et al.(2015)
pTH9907
0.756
0.557
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BXY_0791000.1
Nuclear receptor
1
70
MNCLVCDQKGAARHYGSISCSGCKGFFRRSVRYNRKYVCTFENNCKISNEYRNCCRACRFRKCIEIGLDP
Links
Other
Nuclear receptor
family TFs
Other
Bursaphelenchus xylophilus
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BXY_0816300
Bursaphelenchus xylophilus
BXY_0816300
I
0.898
GPLIN_000452800
Globodera pallida
GPLIN_000452800
N
0.863
BXY_0816200
Bursaphelenchus xylophilus
BXY_0816200
N
0.849
L892_g24140
Steinernema scapterisci
L892_g24140
N
0.776
NBR_0000015501
Nippostrongylus brasiliensis
NBR_0000015501
I
0.776
NECAME_02375
Necator americanus
NECAME_02375
I
0.776
L596_g25921
Steinernema carpocapsae
L596_g25921
N
0.772
scaffold178-EXSNAP2012.20
Pristionchus exspectatus
scaffold178-EXSNAP2012.20
N
0.772
ANCCAN_22066
Ancylostoma caninum
ANCCAN_22066
I
0.763
ANCCEY_12461
Ancylostoma ceylanicum
ANCCEY_12461
I
0.763
ANCDUO_15746
Ancylostoma duodenale
ANCDUO_15746
I
0.763
HCOI01927800
Haemonchus contortus
HCOI01927800
I
0.763
SVUK_0000195901
Strongylus vulgaris
SVUK_0000195901
I
0.763
TELCIR_07460
Teladorsagia circumcincta
TELCIR_07460
I
0.763
CBG22587
Caenorhabditis briggsae
CBG22587
I
0.760
CRE07033
Caenorhabditis remanei
CRE07033
I
0.760
CRE10779
Caenorhabditis remanei
CRE10779
I
0.760
CRE09416
Caenorhabditis remanei
CRE09416
I
0.757
L898_g16530
Steinernema monticolum
L898_g16530
N
0.757
nhr-34
Caenorhabditis elegans
WBGene00003627
D
0.756
BXY_0412900
Bursaphelenchus xylophilus
BXY_0412900
I
0.749
CRE07035
Caenorhabditis remanei
CRE07035
I
0.746