CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig1031.frz3.gene17
(
Meloidogyne hapla
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
MhA1_Contig1031.frz3.gene17
T309620_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig1031.frz3.gene17
Nuclear receptor
3
69
NSCKVCGDVPFGKHYGVTACNGFFRRSICNRRSYICRYGSTCPIVKEQRNACRACRLKRCFEAGMKP
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne hapla
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
genemark-nMf.1.1.scaf00584-processed-gene-0.4
Meloidogyne floridensis
genemark-nMf.1.1.scaf00584-processed-gene-0.4
I
0.986
L596_g9904
Steinernema carpocapsae
L596_g9904
I
0.965
L892_g17832
Steinernema scapterisci
L892_g17832
I
0.965
CBG03466
Caenorhabditis briggsae
CBG03466
I
0.957
CBN28641
Caenorhabditis brenneri
CBN28641
I
0.957
CJA14611
Caenorhabditis japonica
CJA14611
I
0.957
CRE29874
Caenorhabditis remanei
CRE29874
I
0.957
nhr-4
Caenorhabditis elegans
WBGene00003603
I
0.957
ACAC_0000956101
Angiostrongylus cantonensis
ACAC_0000956101
I
0.957
ACOC_0000749401
Angiostrongylus costaricensis
ACOC_0000749401
I
0.957
DICVIV_01644
Dictyocaulus viviparus
DICVIV_01644
I
0.957
HCOI00094500
Haemonchus contortus
HCOI00094500
I
0.957
HCOI01442000
Haemonchus contortus
HCOI01442000
I
0.957
HPBE_0001524301
Heligmosomoides bakeri
HPBE_0001524301
I
0.957
L889_g366
Steinernema feltiae
L889_g366
I
0.942
L893_g5404
Steinernema glaseri
L893_g5404
I
0.942
BXY_0053200
Bursaphelenchus xylophilus
BXY_0053200
I
0.937
DICVIV_11073
Dictyocaulus viviparus
DICVIV_11073
I
0.935
scaffold277-EXSNAP2012.12
Pristionchus exspectatus
scaffold277-EXSNAP2012.12
I
0.935
CRE22212
Caenorhabditis remanei
CRE22212
I
0.933
CBG03860
Caenorhabditis briggsae
CBG03860
I
0.931
CBN05776
Caenorhabditis brenneri
CBN05776
I
0.931
CJA19445
Caenorhabditis japonica
CJA19445
I
0.931
CRE08264
Caenorhabditis remanei
CRE08264
I
0.931
nhr-62
Caenorhabditis elegans
WBGene00003652
I
0.931
HCOI01945300
Haemonchus contortus
HCOI01945300
I
0.931
HCOI02126500
Haemonchus contortus
HCOI02126500
I
0.931
HPLM_0001358001
Haemonchus placei
HPLM_0001358001
I
0.931
Hba_17038
Heterorhabditis bacteriophora
Hba_17038
I
0.930
Ppa-nhr-61
Pristionchus pacificus
PPA27722
I
0.928
HPBE_0001438801
Heligmosomoides bakeri
HPBE_0001438801
I
0.924
L596_g26401
Steinernema carpocapsae
L596_g26401
I
0.919
L892_g17146
Steinernema scapterisci
L892_g17146
I
0.919
L889_g16305
Steinernema feltiae
L889_g16305
I
0.918
L893_g6565
Steinernema glaseri
L893_g6565
I
0.918
L898_g5338
Steinernema monticolum
L898_g5338
I
0.918
PPA14696
Pristionchus pacificus
PPA14696
I
0.916
PTRK_0001236400
Parastrongyloides trichosuri
PTRK_0001236400
I
0.905
CJA02727
Caenorhabditis japonica
CJA02727
I
0.879
nhr-21
Caenorhabditis elegans
WBGene00003620
I
0.876
CBG13142
Caenorhabditis briggsae
CBG13142
I
0.875
CBN04415
Caenorhabditis brenneri
CBN04415
I
0.875
CBN32300
Caenorhabditis brenneri
CBN32300
I
0.875
CRE26423
Caenorhabditis remanei
CRE26423
I
0.875
CJA06107
Caenorhabditis japonica
CJA06107
I
0.869
nhr-61
Caenorhabditis elegans
WBGene00003651
I
0.869
genemark-nMf.1.1.scaf02603-processed-gene-0.3
Meloidogyne floridensis
genemark-nMf.1.1.scaf02603-processed-gene-0.3
I
0.857
CBG04240
Caenorhabditis briggsae
CBG04240
I
0.828
L596_g7829
Steinernema carpocapsae
L596_g7829
I
0.817
BXY_1082600
Bursaphelenchus xylophilus
BXY_1082600
I
0.814
L892_g3438
Steinernema scapterisci
L892_g3438
I
0.814
SPAL_0000533900
Strongyloides papillosus
SPAL_0000533900
I
0.813
SSTP_0000860300
Strongyloides stercoralis
SSTP_0000860300
I
0.813
SVE_0105800
Strongyloides venezuelensis
SVE_0105800
I
0.813
CRE24933
Caenorhabditis remanei
CRE24933
I
0.810
L889_g15424
Steinernema feltiae
L889_g15424
I
0.799
L893_g33656
Steinernema glaseri
L893_g33656
I
0.799
L898_g9613
Steinernema monticolum
L898_g9613
I
0.796
ASU_00971
Ascaris suum
ASU_00971
I
0.792
EVEC_0000864401
Enterobius vermicularis
EVEC_0000864401
I
0.792
SMUV_0000230901
Syphacia muris
SMUV_0000230901
I
0.792
CJA14248
Caenorhabditis japonica
CJA14248
I
0.778
RSKR_0000426600
Rhabditophanes kr3021
RSKR_0000426600
N
0.777
L596_g25910
Steinernema carpocapsae
L596_g25910
I
0.774
L889_g31970
Steinernema feltiae
L889_g31970
I
0.774
L893_g263
Steinernema glaseri
L893_g263
I
0.774
L898_g11608
Steinernema monticolum
L898_g11608
I
0.774
ANCCAN_22066
Ancylostoma caninum
ANCCAN_22066
I
0.751
ANCCEY_12461
Ancylostoma ceylanicum
ANCCEY_12461
I
0.751
ANCDUO_15746
Ancylostoma duodenale
ANCDUO_15746
I
0.751
HCOI01927800
Haemonchus contortus
HCOI01927800
I
0.751
SVUK_0000195901
Strongylus vulgaris
SVUK_0000195901
I
0.751
TELCIR_07460
Teladorsagia circumcincta
TELCIR_07460
I
0.751