PPA14696 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA14696 T305891_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.773 0.657
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA14696 Nuclear receptor 66 132

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG03466 Caenorhabditis briggsae CBG03466 I 0.980
CBN28641 Caenorhabditis brenneri CBN28641 I 0.980
CJA14611 Caenorhabditis japonica CJA14611 I 0.980
CRE29874 Caenorhabditis remanei CRE29874 I 0.980
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.980
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.980
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.980
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.980
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.980
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.980
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.980
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.975
L892_g17832 Steinernema scapterisci L892_g17832 I 0.975
CRE22212 Caenorhabditis remanei CRE22212 I 0.968
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.961
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.960
L889_g366 Steinernema feltiae L889_g366 I 0.959
L893_g5404 Steinernema glaseri L893_g5404 I 0.959
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.959
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.952
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.950
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.948
L889_g16305 Steinernema feltiae L889_g16305 I 0.948
L892_g17146 Steinernema scapterisci L892_g17146 I 0.948
L893_g6565 Steinernema glaseri L893_g6565 I 0.948
L898_g5338 Steinernema monticolum L898_g5338 I 0.948
CBG03860 Caenorhabditis briggsae CBG03860 I 0.947
CBN05776 Caenorhabditis brenneri CBN05776 I 0.947
CJA19445 Caenorhabditis japonica CJA19445 I 0.947
CRE08264 Caenorhabditis remanei CRE08264 I 0.947
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.947
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.947
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.947
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.947
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.947
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.942
MhA1_Contig1031.frz3.gene17 Meloidogyne hapla MhA1_Contig1031.frz3.gene17 N 0.916
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.908
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.880
CJA06107 Caenorhabditis japonica CJA06107 I 0.879
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.879
CBG04240 Caenorhabditis briggsae CBG04240 I 0.861
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.853
CRE24933 Caenorhabditis remanei CRE24933 I 0.850
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.850
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.850
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.850
NECAME_11708 Necator americanus NECAME_11708 N 0.840
CJA02727 Caenorhabditis japonica CJA02727 I 0.835
CBG13142 Caenorhabditis briggsae CBG13142 I 0.829
CBN04415 Caenorhabditis brenneri CBN04415 I 0.829
CBN32300 Caenorhabditis brenneri CBN32300 I 0.829
CRE26423 Caenorhabditis remanei CRE26423 I 0.829
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.819
L892_g3438 Steinernema scapterisci L892_g3438 I 0.817
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.814
ASU_00971 Ascaris suum ASU_00971 I 0.811
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.811
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.811
L898_g9613 Steinernema monticolum L898_g9613 I 0.805
L889_g15424 Steinernema feltiae L889_g15424 I 0.803
L893_g33656 Steinernema glaseri L893_g33656 I 0.803
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.792
L889_g31970 Steinernema feltiae L889_g31970 I 0.792
L893_g263 Steinernema glaseri L893_g263 I 0.792
L898_g11608 Steinernema monticolum L898_g11608 I 0.792
CJA14248 Caenorhabditis japonica CJA14248 I 0.787
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.773
CBG22587 Caenorhabditis briggsae CBG22587 I 0.769
CRE07033 Caenorhabditis remanei CRE07033 I 0.769
CRE10779 Caenorhabditis remanei CRE10779 I 0.769
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.769
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.769
RSKR_0000426600 Rhabditophanes kr3021 RSKR_0000426600 N 0.756
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.753
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.753
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.752
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.752
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.751
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.746
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.746
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.746
NECAME_02375 Necator americanus NECAME_02375 I 0.746
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.746