SMUV_0001036101 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0001036101 T310437_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.775 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0001036101-mRNA-1 Nuclear receptor 6 75

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L889_g366 Steinernema feltiae L889_g366 I 0.906
L893_g5404 Steinernema glaseri L893_g5404 I 0.906
CBG03466 Caenorhabditis briggsae CBG03466 I 0.890
CBN28641 Caenorhabditis brenneri CBN28641 I 0.890
CJA14611 Caenorhabditis japonica CJA14611 I 0.890
CRE29874 Caenorhabditis remanei CRE29874 I 0.890
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.890
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.890
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.890
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.890
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.890
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.890
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.890
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.890
L892_g17832 Steinernema scapterisci L892_g17832 I 0.890
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.875
L889_g16305 Steinernema feltiae L889_g16305 I 0.875
L892_g17146 Steinernema scapterisci L892_g17146 I 0.875
L893_g6565 Steinernema glaseri L893_g6565 I 0.875
L898_g5338 Steinernema monticolum L898_g5338 I 0.875
CJA37776 Caenorhabditis japonica CJA37776 I 0.845
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.841
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.837
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.837
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.837
CRE22212 Caenorhabditis remanei CRE22212 I 0.836
ASU_00971 Ascaris suum ASU_00971 I 0.831
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.831
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.831
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.823
CJA06107 Caenorhabditis japonica CJA06107 I 0.822
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.822
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.822
CJA19445 Caenorhabditis japonica CJA19445 I 0.815
CBG03860 Caenorhabditis briggsae CBG03860 I 0.813
CBN05776 Caenorhabditis brenneri CBN05776 I 0.813
CRE08264 Caenorhabditis remanei CRE08264 I 0.813
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.813
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.812
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.812
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.812
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.811
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.810
L889_g31970 Steinernema feltiae L889_g31970 I 0.810
L893_g263 Steinernema glaseri L893_g263 I 0.810
L898_g11608 Steinernema monticolum L898_g11608 I 0.810
CJA14248 Caenorhabditis japonica CJA14248 I 0.806
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.800
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.795
CJA02727 Caenorhabditis japonica CJA02727 I 0.792
CBG13142 Caenorhabditis briggsae CBG13142 I 0.790
CBN04415 Caenorhabditis brenneri CBN04415 I 0.790
CBN32300 Caenorhabditis brenneri CBN32300 I 0.790
CRE26423 Caenorhabditis remanei CRE26423 I 0.790
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.786
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.783
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.775
CBG22587 Caenorhabditis briggsae CBG22587 I 0.771
CRE07033 Caenorhabditis remanei CRE07033 I 0.771
CRE10779 Caenorhabditis remanei CRE10779 I 0.771
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.771
CRE24933 Caenorhabditis remanei CRE24933 I 0.765
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.761
L892_g3438 Steinernema scapterisci L892_g3438 I 0.761
CBG04240 Caenorhabditis briggsae CBG04240 I 0.759
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.759
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.759
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.759
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.759
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.757
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.756
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.755
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.755
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.755
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.755
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.755
NECAME_02375 Necator americanus NECAME_02375 I 0.755
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.755
HCOI00592600 Haemonchus contortus HCOI00592600 I 0.753
L889_g15424 Steinernema feltiae L889_g15424 I 0.753
L893_g33656 Steinernema glaseri L893_g33656 I 0.753
L898_g9613 Steinernema monticolum L898_g9613 I 0.753
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.753
OESDEN_04341 Oesophagostomum dentatum OESDEN_04341 I 0.751