CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG14997
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG14997
T301544_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-34
M00690_2.00
Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN
PBM
Narasimhan et al.(2015)
pTH9907
0.938
0.671
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG14997
Nuclear receptor
23
92
LSCLVCGDPNAKRHYGAMSCNGCKGFFRRSIWEKRVYHCAFGGRCIIETKYRNRCRQCRLKKCEAVGMDR
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE07035
Caenorhabditis remanei
CRE07035
I
0.989
nhr-100
Caenorhabditis elegans
WBGene00003690
I
0.979
CJA39530
Caenorhabditis japonica
CJA39530
I
0.978
CBN00088
Caenorhabditis brenneri
CBN00088
I
0.965
CBN21958
Caenorhabditis brenneri
CBN21958
I
0.965
nhr-118
Caenorhabditis elegans
WBGene00003708
I
0.964
ASU_00971
Ascaris suum
ASU_00971
I
0.945
EVEC_0000864401
Enterobius vermicularis
EVEC_0000864401
I
0.945
SMUV_0000230901
Syphacia muris
SMUV_0000230901
I
0.945
CBG22587
Caenorhabditis briggsae
CBG22587
I
0.939
CJA14248
Caenorhabditis japonica
CJA14248
I
0.939
CRE07033
Caenorhabditis remanei
CRE07033
I
0.939
CRE10779
Caenorhabditis remanei
CRE10779
I
0.939
PTRK_0000748600
Parastrongyloides trichosuri
PTRK_0000748600
I
0.939
RSKR_0000178700
Rhabditophanes kr3021
RSKR_0000178700
I
0.939
nhr-34
Caenorhabditis elegans
WBGene00003627
D
0.938
L596_g25910
Steinernema carpocapsae
L596_g25910
I
0.938
L889_g31970
Steinernema feltiae
L889_g31970
I
0.938
L893_g263
Steinernema glaseri
L893_g263
I
0.938
L898_g11608
Steinernema monticolum
L898_g11608
I
0.938
TELCIR_07460
Teladorsagia circumcincta
TELCIR_07460
I
0.935
ANCCAN_22066
Ancylostoma caninum
ANCCAN_22066
I
0.934
ANCCEY_12461
Ancylostoma ceylanicum
ANCCEY_12461
I
0.934
ANCDUO_15746
Ancylostoma duodenale
ANCDUO_15746
I
0.934
HCOI01927800
Haemonchus contortus
HCOI01927800
I
0.934
NBR_0000015501
Nippostrongylus brasiliensis
NBR_0000015501
I
0.934
NECAME_02375
Necator americanus
NECAME_02375
I
0.934
SVUK_0000195901
Strongylus vulgaris
SVUK_0000195901
I
0.934
SPAL_0000533900
Strongyloides papillosus
SPAL_0000533900
I
0.933
SSTP_0000860300
Strongyloides stercoralis
SSTP_0000860300
I
0.933
SVE_0105800
Strongyloides venezuelensis
SVE_0105800
I
0.933
CRE09416
Caenorhabditis remanei
CRE09416
I
0.930
scaffold52-EXSNAP2012.30
Pristionchus exspectatus
scaffold52-EXSNAP2012.30
I
0.930
CJA11132
Caenorhabditis japonica
CJA11132
N
0.917
CRE07034
Caenorhabditis remanei
CRE07034
I
0.916
CBG14996
Caenorhabditis briggsae
CBG14996
I
0.909
nhr-138
Caenorhabditis elegans
WBGene00003728
I
0.892
CJA18307
Caenorhabditis japonica
CJA18307
I
0.890
Hba_17946
Heterorhabditis bacteriophora
Hba_17946
I
0.889
nhr-21
Caenorhabditis elegans
WBGene00003620
I
0.822
CRE22212
Caenorhabditis remanei
CRE22212
I
0.817
L596_g10816
Steinernema carpocapsae
L596_g10816
I
0.811
L892_g23093
Steinernema scapterisci
L892_g23093
I
0.811
L898_g32368
Steinernema monticolum
L898_g32368
I
0.808
L889_g2977
Steinernema feltiae
L889_g2977
I
0.805
BXY_0816300
Bursaphelenchus xylophilus
BXY_0816300
I
0.800
CBG03860
Caenorhabditis briggsae
CBG03860
I
0.799
CBN05776
Caenorhabditis brenneri
CBN05776
I
0.799
CRE08264
Caenorhabditis remanei
CRE08264
I
0.799
nhr-62
Caenorhabditis elegans
WBGene00003652
I
0.799
CJA19445
Caenorhabditis japonica
CJA19445
I
0.797
HCOI01945300
Haemonchus contortus
HCOI01945300
I
0.796
HCOI02126500
Haemonchus contortus
HCOI02126500
I
0.796
HPLM_0001358001
Haemonchus placei
HPLM_0001358001
I
0.796
Hba_17038
Heterorhabditis bacteriophora
Hba_17038
I
0.795
CJA02727
Caenorhabditis japonica
CJA02727
I
0.782
CBG03466
Caenorhabditis briggsae
CBG03466
I
0.779
CBN28641
Caenorhabditis brenneri
CBN28641
I
0.779
CJA14611
Caenorhabditis japonica
CJA14611
I
0.779
CRE29874
Caenorhabditis remanei
CRE29874
I
0.779
nhr-4
Caenorhabditis elegans
WBGene00003603
I
0.779
ACAC_0000956101
Angiostrongylus cantonensis
ACAC_0000956101
I
0.779
ACOC_0000749401
Angiostrongylus costaricensis
ACOC_0000749401
I
0.779
DICVIV_01644
Dictyocaulus viviparus
DICVIV_01644
I
0.779
HCOI00094500
Haemonchus contortus
HCOI00094500
I
0.779
HCOI01442000
Haemonchus contortus
HCOI01442000
I
0.779
HPBE_0001524301
Heligmosomoides bakeri
HPBE_0001524301
I
0.779
L596_g7829
Steinernema carpocapsae
L596_g7829
I
0.779
PTRK_0001236400
Parastrongyloides trichosuri
PTRK_0001236400
I
0.779
HPBE_0001438801
Heligmosomoides bakeri
HPBE_0001438801
I
0.778
CBG13142
Caenorhabditis briggsae
CBG13142
I
0.777
CBN04415
Caenorhabditis brenneri
CBN04415
I
0.777
CBN32300
Caenorhabditis brenneri
CBN32300
I
0.777
CRE26423
Caenorhabditis remanei
CRE26423
I
0.777
L892_g3438
Steinernema scapterisci
L892_g3438
I
0.775
L898_g9613
Steinernema monticolum
L898_g9613
I
0.775
L889_g15424
Steinernema feltiae
L889_g15424
I
0.774
L893_g33656
Steinernema glaseri
L893_g33656
I
0.774
Ppa-nhr-61
Pristionchus pacificus
PPA27722
I
0.773
BXY_0412900
Bursaphelenchus xylophilus
BXY_0412900
I
0.769
L596_g9904
Steinernema carpocapsae
L596_g9904
I
0.767
L889_g366
Steinernema feltiae
L889_g366
I
0.767
L892_g17832
Steinernema scapterisci
L892_g17832
I
0.767
L893_g5404
Steinernema glaseri
L893_g5404
I
0.767
BXY_1082600
Bursaphelenchus xylophilus
BXY_1082600
I
0.761
GPLIN_000327200
Globodera pallida
GPLIN_000327200
I
0.761
L596_g26401
Steinernema carpocapsae
L596_g26401
I
0.758
L889_g16305
Steinernema feltiae
L889_g16305
I
0.758
L892_g17146
Steinernema scapterisci
L892_g17146
I
0.758
L893_g6565
Steinernema glaseri
L893_g6565
I
0.758
L898_g5338
Steinernema monticolum
L898_g5338
I
0.758
BXY_0861500
Bursaphelenchus xylophilus
BXY_0861500
I
0.749