CJA18307 (Caenorhabditis japonica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CJA18307 T301991_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.948 0.643
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA18307 Nuclear receptor 14 83

Links

Other Nuclear receptor family TFs
Other Caenorhabditis japonica TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-138 Caenorhabditis elegans WBGene00003728 I 0.990
CRE07034 Caenorhabditis remanei CRE07034 I 0.988
CRE09416 Caenorhabditis remanei CRE09416 I 0.965
CBG14996 Caenorhabditis briggsae CBG14996 I 0.955
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.948
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.948
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.947
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.947
CRE07033 Caenorhabditis remanei CRE07033 I 0.947
CRE10779 Caenorhabditis remanei CRE10779 I 0.947
CBG22587 Caenorhabditis briggsae CBG22587 I 0.947
NECAME_02375 Necator americanus NECAME_02375 I 0.946
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.945
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.945
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.945
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.945
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.942
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.942
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.941
L898_g11608 Steinernema monticolum L898_g11608 I 0.936
L889_g31970 Steinernema feltiae L889_g31970 I 0.936
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.936
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.936
ASU_00971 Ascaris suum ASU_00971 I 0.936
L893_g263 Steinernema glaseri L893_g263 I 0.936
CJA14248 Caenorhabditis japonica CJA14248 I 0.935
CRE07035 Caenorhabditis remanei CRE07035 I 0.925
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.920
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.920
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.920
CBN21958 Caenorhabditis brenneri CBN21958 I 0.917
CBN00088 Caenorhabditis brenneri CBN00088 I 0.917
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.915
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.902
CBG14997 Caenorhabditis briggsae CBG14997 I 0.890
nhr-100 Caenorhabditis elegans WBGene00003690 I 0.874
CJA39530 Caenorhabditis japonica CJA39530 I 0.865
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.854
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.850
BXY_0412900 Bursaphelenchus xylophilus BXY_0412900 I 0.842
L889_g15424 Steinernema feltiae L889_g15424 I 0.837
L893_g33656 Steinernema glaseri L893_g33656 I 0.837
L898_g9613 Steinernema monticolum L898_g9613 I 0.834
L892_g3438 Steinernema scapterisci L892_g3438 I 0.834
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.830
CJA02727 Caenorhabditis japonica CJA02727 I 0.829
CBN04415 Caenorhabditis brenneri CBN04415 I 0.823
CBN32300 Caenorhabditis brenneri CBN32300 I 0.823
CRE26423 Caenorhabditis remanei CRE26423 I 0.823
CBG13142 Caenorhabditis briggsae CBG13142 I 0.823
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.817
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.817
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.792
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.789
L892_g23093 Steinernema scapterisci L892_g23093 I 0.789
L898_g32368 Steinernema monticolum L898_g32368 I 0.786
L889_g2977 Steinernema feltiae L889_g2977 I 0.785
CBN05776 Caenorhabditis brenneri CBN05776 I 0.778
CJA19445 Caenorhabditis japonica CJA19445 I 0.778
CRE08264 Caenorhabditis remanei CRE08264 I 0.778
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.778
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.778
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.778
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.778
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.778
CBG03860 Caenorhabditis briggsae CBG03860 I 0.778
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.778
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.764
CJA06107 Caenorhabditis japonica CJA06107 I 0.764
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.749
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.747