CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
nr2e3
(
Oryzias latipes
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSORLG00000007175
T304285_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NR2E3
M00373_2.00
Homo sapiens
NRAGATCAMN
NKTGATCTYN
PBM
Barrera et al.(2016)
NR2E3_REF
0.983
0.871
Nr2e3
M02708_2.00
Mus musculus
AAGCTTD
HAAGCTT
SELEX
Mathelier et al.(2014)
MA0164.1
0.983
0.871
Nr2e3
M09328_2.00
Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN
Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C
0.983
0.871
NR2E3
M00372_2.00
Homo sapiens
AAAGATCA
TGATCTTT
PBM
Barrera et al.(2016)
NR2E3_R77Q
0.983
0.857
GA30480
M02409_2.00
Drosophila pseudoobscura
RAGATCAM
KTGATCTY
PBM
Weirauch et al.(2014)
pTH5877
0.982
0.871
Hr51
M06432_2.00
Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT
B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012
0.982
0.871
NR2E3
M00370_2.00
Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN
PBM
Barrera et al.(2016)
NR2E3_R76Q
0.980
0.857
NR2E3
M00371_2.00
Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN
PBM
Barrera et al.(2016)
NR2E3_R76W
0.976
0.857
NR2E3
M00369_2.00
Homo sapiens
NGGGRTCAHN
NDTGAYCCCN
PBM
Barrera et al.(2016)
NR2E3_G56R
0.972
0.857
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000009000
Nuclear receptor
25
95
VLCKVCSDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQAGTGRCPVDKAHRNQCQACRLKKCLQSGMNK
Links
Other
Nuclear receptor
family TFs
Other
Oryzias latipes
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPFOG00000006516
Poecilia formosa
ENSPFOG00000006516
I
0.987
ENSXMAG00000015842
Xiphophorus maculatus
ENSXMAG00000015842
I
0.987
DAPPUDRAFT_106791
Daphnia pulex
DAPPUDRAFT_106791
I
0.986
ENSMEUG00000016597
Macropus eugenii
ENSMEUG00000016597
I
0.985
NR2E3
Monodelphis domestica
ENSMODG00000001949
I
0.985
nr2e3
Xenopus tropicalis
XB-GENE-485801
I
0.985
NR2E3
Bos taurus
ENSBTAG00000014236
I
0.983
NR2E3
Callithrix jacchus
ENSCJAG00000018552
I
0.983
NR2E3
Cavia porcellus
ENSCPOG00000008974
I
0.983
ENSCSAG00000013721
Chlorocebus sabaeus
ENSCSAG00000013721
I
0.983
NR2E3
Equus caballus
ENSECAG00000015192
I
0.983
NR2E3
Felis catus
ENSFCAG00000031082
I
0.983
NR2E3
Homo sapiens
ENSG00000278570
D
0.983
NR2E3
Gorilla gorilla
ENSGGOG00000004383
I
0.983
NR2E3
Myotis lucifugus
ENSMLUG00000008408
I
0.983
NR2E3
Macaca mulatta
ENSMMUG00000019276
I
0.983
ENSMPUG00000017103
Mustela putorius furo
ENSMPUG00000017103
I
0.983
Nr2e3
Mus musculus
ENSMUSG00000032292
D
0.983
ENSNLEG00000013807
Nomascus leucogenys
ENSNLEG00000013807
I
0.983
ENSOARG00000018808
Ovis aries
ENSOARG00000018808
I
0.983
NR2E3
Otolemur garnettii
ENSOGAG00000006128
I
0.983
ENSONIG00000015396
Oreochromis niloticus
ENSONIG00000015396
I
0.983
NR2E3
Ochotona princeps
ENSOPRG00000006427
I
0.983
ENSPANG00000016257
Papio anubis
ENSPANG00000016257
I
0.983
NR2E3
Procavia capensis
ENSPCAG00000014733
I
0.983
NR2E3
Pan troglodytes
ENSPTRG00000007242
I
0.983
NR2E3
Pteropus vampyrus
ENSPVAG00000009088
I
0.983
Nr2e3
Rattus norvegicus
ENSRNOG00000050690
I
0.983
ENSSTOG00000012080
Ictidomys tridecemlineatus
ENSSTOG00000012080
I
0.983
NR2E3
Tursiops truncatus
ENSTTRG00000009410
I
0.983
ENSBTAP00000048604-D1
Bos grunniens
ENSBTAP00000048604-D1
I
0.983
Myotis_brandtii_NR2E3_10027281
Myotis brandtii
Myotis_brandtii_NR2E3_10027281
I
0.983
AAEL007190
Aedes aegypti
AAEL007190
I
0.982
ACYPI007601
Acyrthosiphon pisum
ACYPI007601
I
0.982
ADAC006988
Anopheles darlingi
ADAC006988
I
0.982
CGI_10007932
Crassostrea gigas
CGI_10007932
I
0.982
NR2E3
Anolis carolinensis
ENSACAG00000011910
I
0.982
ENSAMXG00000017872
Astyanax mexicanus
ENSAMXG00000017872
I
0.982
nr2e3
Danio rerio
ENSDARG00000045904
I
0.982
nr2e3
Gasterosteus aculeatus
ENSGACG00000004739
I
0.982
NR2E3
Gasterosteus aculeatus
ENSGACG00000017060
I
0.982
ENSGMOG00000019194
Gadus morhua
ENSGMOG00000019194
I
0.982
ENSLACG00000022378
Latimeria chalumnae
ENSLACG00000022378
I
0.982
ENSLOCG00000014973
Lepisosteus oculatus
ENSLOCG00000014973
I
0.982
ENSONIG00000007109
Oreochromis niloticus
ENSONIG00000007109
I
0.982
NR2E3
Oryzias latipes
ENSORLG00000000011
I
0.982
ENSPFOG00000006106
Poecilia formosa
ENSPFOG00000006106
I
0.982
NR2E3
Sus scrofa
ENSSSCG00000004978
I
0.982
NR2E3
Takifugu rubripes
ENSTRUG00000015582
I
0.982
ENSXMAG00000010311
Xiphophorus maculatus
ENSXMAG00000010311
I
0.982
Hr51
Drosophila melanogaster
FBgn0034012
D
0.982
GF13031
Drosophila ananassae
FBgn0090064
I
0.982
GH20426
Drosophila grimshawi
FBgn0127889
I
0.982
GI19610
Drosophila mojavensis
FBgn0142347
I
0.982
GL17752
Drosophila persimilis
FBgn0155355
I
0.982
GD11109
Drosophila simulans
FBgn0182865
I
0.982
GJ14974
Drosophila virilis
FBgn0202177
I
0.982
GK20892
Drosophila willistoni
FBgn0222886
I
0.982
GE13645
Drosophila yakuba
FBgn0231304
I
0.982
GA30480
Drosophila pseudoobscura
FBgn0264774
D
0.982
GB49738
Apis mellifera
GB49738
I
0.982
LotgiG137595
Lottia gigantea
LotgiG137595
I
0.982
NV14480
Nasonia vitripennis
NV14480
I
0.982
PHUM039420
Pediculus humanus
PHUM039420
I
0.982
RPRC002557
Rhodnius prolixus
RPRC002557
I
0.982
TC009378
Tribolium castaneum
TC009378
I
0.982
Alligator_sinensis_CCG020979.1
Alligator sinensis
Alligator_sinensis_CCG020979.1
I
0.982
Cmyd_10012017
Chelonia mydas
Cmyd_10012017
I
0.982
Hsal_07902--XP_396999.3_APIME
Harpegnathos saltator
Hsal_07902--XP_396999.3_APIME
I
0.982
Ogr12843
Ophisaurus gracilis
Ogr12843
I
0.982
Pvit_13689
Pogona vitticeps
Pvit_13689
I
0.982
LDEC022044
Leptinotarsa decemlineata
LDEC022044
I
0.982
AALB001133
Anopheles albimanus
AALB001133
I
0.982
AARA003887
Anopheles arabiensis
AARA003887
I
0.982
AATE003142
Anopheles atroparvus
AATE003142
I
0.982
ACOM026748
Anopheles coluzzii
ACOM026748
I
0.982
AEPI011067
Anopheles epiroticus
AEPI011067
I
0.982
AFAF011447
Anopheles farauti
AFAF011447
I
0.982
AMEM000983
Anopheles merus
AMEM000983
I
0.982
MDOA010244
Musca domestica
MDOA010244
I
0.982
NR2E3
Tupaia belangeri
ENSTBEG00000011672
I
0.981
e_gw.107.44.1
Branchiostoma floridae
e_gw.107.44.1
I
0.981
e_gw.324.28.1
Branchiostoma floridae
e_gw.324.28.1
I
0.981
EFV56045
Trichinella spiralis
EFV56045
I
0.980
ENSGMOG00000008342
Gadus morhua
ENSGMOG00000008342
I
0.980
HelroG139475
Helobdella robusta
HelroG139475
I
0.980
L798_02234
Zootermopsis nevadensis
L798_02234
I
0.980
D917_05007
Trichinella nativa
D917_05007
I
0.980
ENSFALG00000009699
Ficedula albicollis
ENSFALG00000009699
I
0.979
NR2E3
Gallus gallus
ENSGALG00000002093
I
0.979
ENSTGUG00000004498
Taeniopygia guttata
ENSTGUG00000004498
I
0.979
Aan_R004022
Calypte anna
Aan_R004022
I
0.979
Afo_R007066
Aptenodytes forsteri
Afo_R007066
I
0.979
Gfo_R008863
Geospiza fortis
Gfo_R008863
I
0.979
BGLB004019
Biomphalaria glabrata
BGLB004019
I
0.979
CapteG171557
Capitella teleta
CapteG171557
I
0.978
tetur01g11040
Tetranychus urticae
tetur01g11040
I
0.978
D918_07443
Trichuris suis
D918_07443
I
0.978
TTRE_0000600201
Trichuris trichiura
TTRE_0000600201
I
0.978
Bm4485
Brugia malayi
Bm4485
I
0.975
CBG14155
Caenorhabditis briggsae
CBG14155
I
0.975
CBN22518
Caenorhabditis brenneri
CBN22518
I
0.975
CJA07370
Caenorhabditis japonica
CJA07370
I
0.975
CRE00427
Caenorhabditis remanei
CRE00427
I
0.975
LOAG_06205
Loa loa
LOAG_06205
I
0.975
Ppa-fax-1
Pristionchus pacificus
PPA00264
I
0.975
fax-1
Caenorhabditis elegans
WBGene00001400
I
0.975
WBGene00240517
Onchocerca volvulus
WBGene00240517
I
0.975
SMU15029049
Schmidtea mediterranea
SMU15029049
I
0.975
SMU15038222
Schmidtea mediterranea
SMU15038222
I
0.975
ANCCAN_05510
Ancylostoma caninum
ANCCAN_05510
I
0.975
ANCCEY_01724
Ancylostoma ceylanicum
ANCCEY_01724
I
0.975
ASU_07884
Ascaris suum
ASU_07884
I
0.975
BTMF_0001091401
Brugia timori
BTMF_0001091401
I
0.975
BXY_0327700
Bursaphelenchus xylophilus
BXY_0327700
I
0.975
CGOC_0000187501
Cylicostephanus goldi
CGOC_0000187501
I
0.975
DICVIV_11193
Dictyocaulus viviparus
DICVIV_11193
I
0.975
genemark-nMf.1.1.scaf00188-processed-gene-0.4
Meloidogyne floridensis
genemark-nMf.1.1.scaf00188-processed-gene-0.4
I
0.975
Hba_15323
Heterorhabditis bacteriophora
Hba_15323
I
0.975
HCOI01781300
Haemonchus contortus
HCOI01781300
I
0.975
MhA1_Contig1792.frz3.gene6
Meloidogyne hapla
MhA1_Contig1792.frz3.gene6
I
0.975
nAv.1.0.1.g01891
Acanthocheilonema viteae
nAv.1.0.1.g01891
I
0.975
nDi.2.2.2.g10236
Dirofilaria immitis
nDi.2.2.2.g10236
I
0.975
nLs.2.1.2.g01701
Litomosoides sigmodontis
nLs.2.1.2.g01701
I
0.975
nOo.2.0.1.g01040
Onchocerca ochengi
nOo.2.0.1.g01040
I
0.975
nOo.2.0.1.g10097
Onchocerca ochengi
nOo.2.0.1.g10097
I
0.975
nOo.2.0.1.g11611
Onchocerca ochengi
nOo.2.0.1.g11611
I
0.975
OFLC_0000991001
Onchocerca flexuosa
OFLC_0000991001
I
0.975
scaffold296-EXSNAP2012.8
Pristionchus exspectatus
scaffold296-EXSNAP2012.8
I
0.975
SPAL_0001117000
Strongyloides papillosus
SPAL_0001117000
I
0.975
SSTP_0000090600
Strongyloides stercoralis
SSTP_0000090600
I
0.975
SVE_0933400
Strongyloides venezuelensis
SVE_0933400
I
0.975
TCLT_0000456401
Thelazia callipaeda
TCLT_0000456401
I
0.975
TCNE_0001716001
Toxocara canis
TCNE_0001716001
I
0.975
SPU_014405
Strongylocentrotus purpuratus
SPU_014405
I
0.974
ECPE_0000243601
Echinostoma caproni
ECPE_0000243601
I
0.974
TRE_0000223201
Trichobilharzia regenti
TRE_0000223201
I
0.974
Smp_167770
Schistosoma mansoni
Smp_167770
I
0.973
GPLIN_000669800
Globodera pallida
GPLIN_000669800
I
0.973
RSKR_0000698500
Rhabditophanes kr3021
RSKR_0000698500
I
0.973
SMRZ_0000841101
Schistosoma margrebowiei
SMRZ_0000841101
I
0.973
SMTD_0001566201
Schistosoma mattheei
SMTD_0001566201
I
0.973
Sakowv30007027m.g
Saccoglossus kowalevskii
Sakowv30007027m.g
I
0.972
L596_g2163
Steinernema carpocapsae
L596_g2163
I
0.972
L889_g11978
Steinernema feltiae
L889_g11978
I
0.972
L892_g9366
Steinernema scapterisci
L892_g9366
I
0.972
L893_g28297
Steinernema glaseri
L893_g28297
I
0.972
L898_g15355
Steinernema monticolum
L898_g15355
I
0.972
PTRK_0000446300
Parastrongyloides trichosuri
PTRK_0000446300
I
0.972
SBAD_0000006401
Soboliphyme baturini
SBAD_0000006401
I
0.972
csin100859
Clonorchis sinensis
csin100859
I
0.971
SMUV_0000245701
Syphacia muris
SMUV_0000245701
I
0.970
ENSPMAG00000009792
Petromyzon marinus
ENSPMAG00000009792
I
0.969
EVEC_0000564801
Enterobius vermicularis
EVEC_0000564801
I
0.967
ENSAMEG00000008835
Ailuropoda melanoleuca
ENSAMEG00000008835
I
0.960
NR2E3
Tetraodon nigroviridis
ENSTNIG00000005150
I
0.955
SMAR005628
Strigamia maritima
SMAR005628
I
0.931
snap_masked-nMf.1.1.scaf29070-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf29070-processed-gene-0.1
I
0.930
WUBG_05086
Wuchereria bancrofti
WUBG_05086
I
0.836
TELCIR_21617
Teladorsagia circumcincta
TELCIR_21617
I
0.836
Ppa-nhr-3
Pristionchus pacificus
PPA28597
I
0.821
scaffold395-EXSNAP2012.23
Pristionchus exspectatus
scaffold395-EXSNAP2012.23
I
0.821
OESDEN_00114
Oesophagostomum dentatum
OESDEN_00114
I
0.811
ISCW019467
Ixodes scapularis
ISCW019467
I
0.808
SMAR006008
Strigamia maritima
SMAR006008
I
0.805
BXY_0039800
Bursaphelenchus xylophilus
BXY_0039800
I
0.798
PHUM331460
Pediculus humanus
PHUM331460
I
0.790
HHAL007294-PA
Halyomorpha halys
HHAL007294-PA
I
0.787
ISCW010891
Ixodes scapularis
ISCW010891
I
0.784
tetur08g01210
Tetranychus urticae
tetur08g01210
I
0.782
NR2E3
Meleagris gallopavo
ENSMGAG00000001449
I
0.781
RPRC007025
Rhodnius prolixus
RPRC007025
I
0.779
CGI_10028920
Crassostrea gigas
CGI_10028920
I
0.777
LotgiG130367
Lottia gigantea
LotgiG130367
I
0.777
EFV59616
Trichinella spiralis
EFV59616
I
0.774
D917_09121
Trichinella nativa
D917_09121
I
0.774
DAPPUDRAFT_299738
Daphnia pulex
DAPPUDRAFT_299738
I
0.772
ALUE_0000009401
Ascaris lumbricoides
ALUE_0000009401
I
0.772
KGM_21528
Danaus plexippus
KGM_21528
I
0.767
BGIBMGA002000
Bombyx mori
BGIBMGA002000
I
0.766
HMEL012854
Heliconius melpomene
HMEL012854
I
0.766
CapteG226190
Capitella teleta
CapteG226190
I
0.765
CpipJ_CPIJ012467
Culex pipiens
CpipJ_CPIJ012467
I
0.760
AAEL003020
Aedes aegypti
AAEL003020
I
0.760
ADAC006907
Anopheles darlingi
ADAC006907
I
0.760
AGAP000819
Anopheles gambiae
AGAP000819
I
0.760
CPIJ012467
Culex quinquefasciatus
CPIJ012467
I
0.760
AALB003284
Anopheles albimanus
AALB003284
I
0.760
AARA002508
Anopheles arabiensis
AARA002508
I
0.760
ACOM036097
Anopheles coluzzii
ACOM036097
I
0.760
ACUA015273
Anopheles culicifacies
ACUA015273
I
0.760
AEPI011017
Anopheles epiroticus
AEPI011017
I
0.760
AFAF018214
Anopheles farauti
AFAF018214
I
0.760
AFUN007550
Anopheles funestus
AFUN007550
I
0.760
AMAM000431
Anopheles maculatus
AMAM000431
I
0.760
AMEC019536
Anopheles melas
AMEC019536
I
0.760
AMEM005434
Anopheles merus
AMEM005434
I
0.760
AMIN005547
Anopheles minimus
AMIN005547
I
0.760
AQUA002816
Anopheles quadriannulatus
AQUA002816
I
0.760
ASTEI01071
Anopheles stephensi
ASTEI01071
I
0.760
AATE006814
Anopheles atroparvus
AATE006814
I
0.759
ASIS014807
Anopheles sinensis
ASIS014807
I
0.759
GB50436
Apis mellifera
GB50436
I
0.753
ADIR001527
Anopheles dirus
ADIR001527
I
0.753
Cflo_06716--XP_001121187.1_APIME
Camponotus floridanus
Cflo_06716--XP_001121187.1_APIME
I
0.752
Hsal_06558--XP_001121187.1_APIME
Harpegnathos saltator
Hsal_06558--XP_001121187.1_APIME
I
0.752
SMU15015045
Schmidtea mediterranea
SMU15015045
I
0.748
HDID_0000867201
Hymenolepis diminuta
HDID_0000867201
I
0.748
HmN_000489600
Hymenolepis microstoma
HmN_000489600
I
0.748
HNAJ_0000904901
Hymenolepis nana
HNAJ_0000904901
I
0.748
TTAC_0000853401
Hydatigera taeniaeformis
TTAC_0000853401
I
0.748
YQE_11038
Dendroctonus ponderosae
YQE_11038
I
0.746