CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PEQ_0000894301
(
Parascaris equorum
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
PEQ_0000894301
T309980_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.782
0.529
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PEQ_0000894301-mRNA-1
Nuclear receptor
17
89
EPCVVCGDAASGIHYGVSSCNGCKTFFRRVIIENRTYSCKQSGDCPIDKDMRCSCRHCRFKKFKCRAKEKAEI
Links
Other
Nuclear receptor
family TFs
Other
Parascaris equorum
TFs
116 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_02770
Ascaris suum
ASU_02770
I
0.985
EVEC_0000477801
Enterobius vermicularis
EVEC_0000477801
I
0.985
SMUV_0000657401
Syphacia muris
SMUV_0000657401
I
0.985
BXY_0988800
Bursaphelenchus xylophilus
BXY_0988800
I
0.969
PTRK_0001163100
Parastrongyloides trichosuri
PTRK_0001163100
I
0.965
SPAL_0001084400
Strongyloides papillosus
SPAL_0001084400
I
0.965
SPAL_0001084500
Strongyloides papillosus
SPAL_0001084500
I
0.965
SSTP_0001035300
Strongyloides stercoralis
SSTP_0001035300
I
0.965
SVE_0956400
Strongyloides venezuelensis
SVE_0956400
I
0.965
PPA16374
Pristionchus pacificus
PPA16374
I
0.963
ACOC_0000744201
Angiostrongylus costaricensis
ACOC_0000744201
I
0.962
ANCCAN_19046
Ancylostoma caninum
ANCCAN_19046
I
0.962
ANCDUO_17367
Ancylostoma duodenale
ANCDUO_17367
I
0.962
DICVIV_13545
Dictyocaulus viviparus
DICVIV_13545
I
0.962
HCOI00052900
Haemonchus contortus
HCOI00052900
I
0.962
NECAME_01070
Necator americanus
NECAME_01070
I
0.962
L893_g22683
Steinernema glaseri
L893_g22683
I
0.956
L889_g8914
Steinernema feltiae
L889_g8914
I
0.955
scaffold584-EXSNAP2012.2
Pristionchus exspectatus
scaffold584-EXSNAP2012.2
I
0.949
scaffold726-EXSNAP2012.5
Pristionchus exspectatus
scaffold726-EXSNAP2012.5
I
0.949
PPA20196
Pristionchus pacificus
PPA20196
I
0.946
scaffold290-EXSNAP2012.30
Pristionchus exspectatus
scaffold290-EXSNAP2012.30
I
0.946
L893_g15045
Steinernema glaseri
L893_g15045
I
0.945
CBG00093
Caenorhabditis briggsae
CBG00093
I
0.937
CJA06153
Caenorhabditis japonica
CJA06153
I
0.937
CRE24074
Caenorhabditis remanei
CRE24074
I
0.937
nhr-17
Caenorhabditis elegans
WBGene00003616
I
0.937
CBN07240
Caenorhabditis brenneri
CBN07240
I
0.935
L596_g702
Steinernema carpocapsae
L596_g702
I
0.935
L892_g5067
Steinernema scapterisci
L892_g5067
I
0.935
L596_g14199
Steinernema carpocapsae
L596_g14199
I
0.919
L892_g2422
Steinernema scapterisci
L892_g2422
I
0.919
L898_g30390
Steinernema monticolum
L898_g30390
I
0.909
L889_g22425
Steinernema feltiae
L889_g22425
N
0.880
CRE26981
Caenorhabditis remanei
CRE26981
I
0.864
EVEC_0000027301
Enterobius vermicularis
EVEC_0000027301
I
0.807
SPAL_0000490500
Strongyloides papillosus
SPAL_0000490500
I
0.799
SVE_1951500
Strongyloides venezuelensis
SVE_1951500
I
0.799
NECAME_01944
Necator americanus
NECAME_01944
I
0.798
L596_g23777
Steinernema carpocapsae
L596_g23777
I
0.797
L893_g25227
Steinernema glaseri
L893_g25227
I
0.797
RSKR_0000342500
Rhabditophanes kr3021
RSKR_0000342500
I
0.797
ALUE_0002179401
Ascaris lumbricoides
ALUE_0002179401
I
0.796
ASU_12501
Ascaris suum
ASU_12501
I
0.796
NECAME_00872
Necator americanus
NECAME_00872
I
0.796
MhA1_Contig2491.frz3.gene4
Meloidogyne hapla
MhA1_Contig2491.frz3.gene4
I
0.788
SSTP_0000546600
Strongyloides stercoralis
SSTP_0000546600
I
0.788
SMUV_0000708401
Syphacia muris
SMUV_0000708401
I
0.787
BXY_0631600
Bursaphelenchus xylophilus
BXY_0631600
I
0.786
HCOI01525900
Haemonchus contortus
HCOI01525900
I
0.784
CBG01866
Caenorhabditis briggsae
CBG01866
I
0.782
CBN19235
Caenorhabditis brenneri
CBN19235
I
0.782
CJA13458
Caenorhabditis japonica
CJA13458
I
0.782
CRE03310
Caenorhabditis remanei
CRE03310
I
0.782
nhr-1
Caenorhabditis elegans
WBGene00003600
D
0.782
ANCCEY_01961
Ancylostoma ceylanicum
ANCCEY_01961
I
0.782
HCOI01554200
Haemonchus contortus
HCOI01554200
I
0.782
HPBE_0000837301
Heligmosomoides bakeri
HPBE_0000837301
I
0.782
CBG23319
Caenorhabditis briggsae
CBG23319
I
0.781
ANCCAN_14103
Ancylostoma caninum
ANCCAN_14103
I
0.781
ANCCAN_17081
Ancylostoma caninum
ANCCAN_17081
I
0.781
HCOI00601000
Haemonchus contortus
HCOI00601000
I
0.781
HPLM_0000564201
Haemonchus placei
HPLM_0000564201
I
0.781
PTRK_0001312000
Parastrongyloides trichosuri
PTRK_0001312000
I
0.780
nhr-10
Caenorhabditis elegans
WBGene00003609
I
0.779
ACAC_0001297301
Angiostrongylus cantonensis
ACAC_0001297301
I
0.779
ANCCAN_09880
Ancylostoma caninum
ANCCAN_09880
I
0.778
ASU_10584
Ascaris suum
ASU_10584
I
0.778
EVEC_0001313601
Enterobius vermicularis
EVEC_0001313601
I
0.778
L596_g19151
Steinernema carpocapsae
L596_g19151
I
0.778
L889_g22901
Steinernema feltiae
L889_g22901
I
0.778
L892_g5079
Steinernema scapterisci
L892_g5079
I
0.778
L893_g15276
Steinernema glaseri
L893_g15276
I
0.778
L898_g8573
Steinernema monticolum
L898_g8573
I
0.778
SMUV_0000475001
Syphacia muris
SMUV_0000475001
I
0.778
HPBE_0001246601
Heligmosomoides bakeri
HPBE_0001246601
I
0.777
Bm5319
Brugia malayi
Bm5319
I
0.775
LOAG_00300
Loa loa
LOAG_00300
I
0.775
BTMF_0001388101
Brugia timori
BTMF_0001388101
I
0.775
nDi.2.2.2.g02318
Dirofilaria immitis
nDi.2.2.2.g02318
I
0.775
nOo.2.0.1.g01530
Onchocerca ochengi
nOo.2.0.1.g01530
I
0.775
OFLC_0001450101
Onchocerca flexuosa
OFLC_0001450101
I
0.775
TCLT_0000399401
Thelazia callipaeda
TCLT_0000399401
I
0.775
ACOC_0000700901
Angiostrongylus costaricensis
ACOC_0000700901
I
0.774
BXY_0599800
Bursaphelenchus xylophilus
BXY_0599800
I
0.774
DICVIV_09815
Dictyocaulus viviparus
DICVIV_09815
I
0.774
SPAL_0001637600
Strongyloides papillosus
SPAL_0001637600
I
0.770
SSTP_0000055100
Strongyloides stercoralis
SSTP_0000055100
I
0.770
SVE_0429000
Strongyloides venezuelensis
SVE_0429000
I
0.770
PTRK_0000994100
Parastrongyloides trichosuri
PTRK_0000994100
I
0.766
L596_g12276
Steinernema carpocapsae
L596_g12276
I
0.765
L889_g7780
Steinernema feltiae
L889_g7780
I
0.765
L892_g8671
Steinernema scapterisci
L892_g8671
I
0.765
L898_g22454
Steinernema monticolum
L898_g22454
I
0.765
PTRK_0000480700
Parastrongyloides trichosuri
PTRK_0000480700
I
0.763
SPAL_0001712900
Strongyloides papillosus
SPAL_0001712900
I
0.763
SSTP_0001253400
Strongyloides stercoralis
SSTP_0001253400
I
0.763
SVE_0146100
Strongyloides venezuelensis
SVE_0146100
I
0.763
L596_g12321
Steinernema carpocapsae
L596_g12321
I
0.762
L889_g29879
Steinernema feltiae
L889_g29879
I
0.762
L893_g3010
Steinernema glaseri
L893_g3010
I
0.762
L898_g2764
Steinernema monticolum
L898_g2764
I
0.762
nhr-101
Caenorhabditis elegans
WBGene00003691
I
0.760
WBGene00241993
Onchocerca volvulus
WBGene00241993
I
0.760
NBR_0001576001
Nippostrongylus brasiliensis
NBR_0001576001
I
0.760
ACOC_0000869501
Angiostrongylus costaricensis
ACOC_0000869501
I
0.759
HPBE_0001154501
Heligmosomoides bakeri
HPBE_0001154501
I
0.759
CBG16594
Caenorhabditis briggsae
CBG16594
I
0.757
CBN20518
Caenorhabditis brenneri
CBN20518
I
0.757
ASIM_0001308601
Anisakis simplex
ASIM_0001308601
I
0.757
PTRK_0001020800
Parastrongyloides trichosuri
PTRK_0001020800
I
0.753
SPAL_0001099500
Strongyloides papillosus
SPAL_0001099500
I
0.753
SSTP_0000769100
Strongyloides stercoralis
SSTP_0000769100
I
0.753
SVE_0858700
Strongyloides venezuelensis
SVE_0858700
I
0.753
scaffold314-EXSNAP2012.19
Pristionchus exspectatus
scaffold314-EXSNAP2012.19
I
0.752
GPLIN_000337500
Globodera pallida
GPLIN_000337500
I
0.747