GA18413 (Drosophila pseudoobscura)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 FBgn0078415 T305300_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.987 0.986
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.987 0.986
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.987 0.986
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.985 0.943
kni
M06557_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1 		0.979 0.843
kni
M06419_2.00 		Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320 		0.979 0.843
kni
M06420_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320 		0.979 0.843
kni
M06421_2.00 		Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320 		0.979 0.843
kni
M08225_2.00 		Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24 		0.979 0.843
kni
M09687_2.00 		Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni 		0.979 0.843
kni
M11189_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6 		0.979 0.843
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.964 0.829
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.964 0.829
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0286049 Nuclear receptor 12 82

Links

Other Nuclear receptor family TFs
Other Drosophila pseudoobscura TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACHR005874 Anopheles christyi ACHR005874 N
nRc.2.0.1.g38267 Romanomermis culicivorax nRc.2.0.1.g38267 N
D918_02806 Trichuris suis D918_02806 N
PPAI010077 Phlebotomus papatasi PPAI010077 N
LLOJ001671 Lutzomyia longipalpis LLOJ001671 N
ASTEI07079 Anopheles stephensi ASTEI07079 N
AQUA008560 Anopheles quadriannulatus AQUA008560 N
AMIN002617 Anopheles minimus AMIN002617 N
AMAM016687 Anopheles maculatus AMAM016687 N
AEPI001686 Anopheles epiroticus AEPI001686 N
ADIR006615 Anopheles dirus ADIR006615 N
ACEP10070 Atta cephalotes ACEP10070 N
AARA009758 Anopheles arabiensis AARA009758 N
AALB003341 Anopheles albimanus AALB003341 N
LCUP011133 Lucilia cuprina LCUP011133 N
HHAL003986-PA Halyomorpha halys HHAL003986-PA N
Ocbimv22022378m.g Octopus bimaculoides Ocbimv22022378m.g N
Hsal_05147--XP_392355.3_APIME Harpegnathos saltator Hsal_05147--XP_392355.3_APIME N
Cflo_00867--XP_392355.3_APIME Camponotus floridanus Cflo_00867--XP_392355.3_APIME N
HMEL013966 Heliconius melpomene HMEL013966 N
GB55033 Apis mellifera GB55033 N
BGIBMGA005085 Bombyx mori BGIBMGA005085 N