CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPU_015456
(
Strongylocentrotus purpuratus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
SPU_015456
T306047_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr39
M03942_2.00
Drosophila melanogaster
CAAGGHCRN
NYGDCCTTG
SELEX
Nitta et al.(2015)
Hr39_1
0.802
0.486
Hr39
M03943_2.00
Drosophila melanogaster
CAAGGYCRH
DYGRCCTTG
SELEX
Nitta et al.(2015)
Hr39_2
0.802
0.486
nhr-25
M08226_2.00
Caenorhabditis elegans
MAAGGTCA
TGACCTTK
ChIP-seq
Contrino et al.(2012)
Mw160
0.773
0.500
ftz-f1
M02407_2.00
Drosophila melanogaster
RRGGTCAH
DTGACCYY
PBM
Weirauch et al.(2014)
pTH5709
0.773
0.529
ftz-f1
M06417_2.00
Drosophila melanogaster
MMRKYYSAAGGWCRCYGM
KCRGYGWCCTTSRRMYKK
B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078
0.773
0.529
ftz-f1
M06418_2.00
Drosophila melanogaster
AAGGTCA
TGACCTT
B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078
0.773
0.529
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPU_015456-tr
Nuclear receptor
53
122
QKCLVCGDKASGLHYTVVSCESCKSFFGRKIKSKAKFTCEANGNCVMDLYTRRHCPACRLQKCLDVGMKP
Links
Other
Nuclear receptor
family TFs
Other
Strongylocentrotus purpuratus
TFs
141 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ftz-f1
Drosophila melanogaster
FBgn0001078
D
0.773
Hr39
Drosophila melanogaster
FBgn0261239
D
0.802
nhr-25
Caenorhabditis elegans
WBGene00003623
D
0.773
CpipJ_CPIJ004151
Culex pipiens
CpipJ_CPIJ004151
I
0.786
CpipJ_CPIJ008216
Culex pipiens
CpipJ_CPIJ008216
I
0.772
AAEL001304
Aedes aegypti
AAEL001304
I
0.783
BETAFTZF1
Aedes aegypti
AAEL002062
I
0.772
ACEP18350
Atta cephalotes
ACEP18350
I
0.773
ACYPI003708
Acyrthosiphon pisum
ACYPI003708
I
0.773
ACYPI006350
Acyrthosiphon pisum
ACYPI006350
I
0.761
ADAC008377
Anopheles darlingi
ADAC008377
I
0.772
ADAC010223
Anopheles darlingi
ADAC010223
I
0.783
AGAP005661
Anopheles gambiae
AGAP005661
I
0.772
AGAP009400
Anopheles gambiae
AGAP009400
I
0.783
BGIBMGA000716
Bombyx mori
BGIBMGA000716
I
0.771
BGIBMGA007914
Bombyx mori
BGIBMGA007914
I
0.792
CapteG153528
Capitella teleta
CapteG153528
I
0.755
CBG16911
Caenorhabditis briggsae
CBG16911
I
0.773
CBN18412
Caenorhabditis brenneri
CBN18412
I
0.773
CJA11067
Caenorhabditis japonica
CJA11067
I
0.773
CPIJ004151
Culex quinquefasciatus
CPIJ004151
I
0.786
CPIJ008216
Culex quinquefasciatus
CPIJ008216
I
0.772
CRE24092
Caenorhabditis remanei
CRE24092
I
0.773
DAPPUDRAFT_305379
Daphnia pulex
DAPPUDRAFT_305379
I
0.776
DAPPUDRAFT_57218
Daphnia pulex
DAPPUDRAFT_57218
I
0.783
EFV55267
Trichinella spiralis
EFV55267
I
0.777
ENSONIG00000001686
Oreochromis niloticus
ENSONIG00000001686
I
0.750
nr5a5
Oryzias latipes
ENSORLG00000006019
I
0.749
ENSPFOG00000001645
Poecilia formosa
ENSPFOG00000001645
I
0.750
Nr1h5
Rattus norvegicus
ENSRNOG00000023073
I
0.775
GA17924
Drosophila pseudoobscura
FBgn0077933
I
0.773
GA21254
Drosophila pseudoobscura
FBgn0081242
I
0.802
GF10806
Drosophila ananassae
FBgn0087846
I
0.773
GF14318
Drosophila ananassae
FBgn0091345
I
0.802
GG15724
Drosophila erecta
FBgn0107968
I
0.773
GG21291
Drosophila erecta
FBgn0113470
I
0.802
GH10687
Drosophila grimshawi
FBgn0118168
I
0.802
GH17194
Drosophila grimshawi
FBgn0124664
I
0.773
GI11193
Drosophila mojavensis
FBgn0133954
I
0.802
GI13962
Drosophila mojavensis
FBgn0136716
I
0.773
GL25259
Drosophila persimilis
FBgn0162843
I
0.773
GL26651
Drosophila persimilis
FBgn0164232
I
0.802
GM14921
Drosophila sechellia
FBgn0169842
I
0.773
GM23404
Drosophila sechellia
FBgn0178271
I
0.802
GD12327
Drosophila simulans
FBgn0184059
I
0.773
GD24312
Drosophila simulans
FBgn0195659
I
0.802
GJ13743
Drosophila virilis
FBgn0200964
I
0.773
GJ18326
Drosophila virilis
FBgn0205485
I
0.802
GK10750
Drosophila willistoni
FBgn0212762
I
0.773
GK18731
Drosophila willistoni
FBgn0220729
I
0.790
GE12908
Drosophila yakuba
FBgn0230623
I
0.802
GE22055
Drosophila yakuba
FBgn0239287
I
0.773
GB42142
Apis mellifera
GB42142
I
0.773
GB45414
Apis mellifera
GB45414
I
0.773
HelroG108893
Helobdella robusta
HelroG108893
I
0.813
HMEL008775
Heliconius melpomene
HMEL008775
I
0.771
HMEL010318
Heliconius melpomene
HMEL010318
I
0.792
ISCW020376
Ixodes scapularis
ISCW020376
I
0.773
KGM_10874
Danaus plexippus
KGM_10874
I
0.771
KGM_16581
Danaus plexippus
KGM_16581
I
0.792
L798_09573
Zootermopsis nevadensis
L798_09573
I
0.786
L798_15156
Zootermopsis nevadensis
L798_15156
I
0.773
LotgiG120156
Lottia gigantea
LotgiG120156
I
0.775
MCINX000753
Melitaea cinxia
MCINX000753
I
0.771
MESCA000912
Megaselia scalaris
MESCA000912
I
0.802
NV13389
Nasonia vitripennis
NV13389
I
0.773
NV18828
Nasonia vitripennis
NV18828
I
0.773
PHUM318510
Pediculus humanus
PHUM318510
I
0.780
PHUM475850
Pediculus humanus
PHUM475850
I
0.773
RPRC002968
Rhodnius prolixus
RPRC002968
I
0.773
RPRC014120
Rhodnius prolixus
RPRC014120
I
0.773
SINV18006
Solenopsis invicta
SINV18006
I
0.785
SMAR006163
Strigamia maritima
SMAR006163
I
0.777
SPU_004526
Strongylocentrotus purpuratus
SPU_004526
I
0.869
TC002550
Tribolium castaneum
TC002550
I
0.773
TC014986
Tribolium castaneum
TC014986
I
0.771
tetur08g06490
Tetranychus urticae
tetur08g06490
I
0.773
YQE_06807
Dendroctonus ponderosae
YQE_06807
I
0.777
Cflo_07896--XP_396918.3_APIME
Camponotus floridanus
Cflo_07896--XP_396918.3_APIME
I
0.771
Hsal_06206--XP_396918.3_APIME
Harpegnathos saltator
Hsal_06206--XP_396918.3_APIME
I
0.773
e_gw.62.61.1
Branchiostoma floridae
e_gw.62.61.1
I
0.827
e_gw.719.1.1
Branchiostoma floridae
e_gw.719.1.1
I
0.827
Ocbimv22003275m.g
Octopus bimaculoides
Ocbimv22003275m.g
I
0.762
Ocbimv22026489m.g
Octopus bimaculoides
Ocbimv22026489m.g
I
0.799
Sakowv30005160m.g
Saccoglossus kowalevskii
Sakowv30005160m.g
I
0.807
Sakowv30014378m.g
Saccoglossus kowalevskii
Sakowv30014378m.g
I
0.982
CLEC003396
Cimex lectularius
CLEC003396
I
0.778
CLEC025178
Cimex lectularius
CLEC025178
I
0.773
HHAL006554-PA
Halyomorpha halys
HHAL006554-PA
I
0.773
LCUP003627
Lucilia cuprina
LCUP003627
I
0.802
LCUP007669
Lucilia cuprina
LCUP007669
I
0.773
LDEC010317
Leptinotarsa decemlineata
LDEC010317
I
0.785
LDEC014511
Leptinotarsa decemlineata
LDEC014511
I
0.773
AALB000437
Anopheles albimanus
AALB000437
I
0.783
AALB005825
Anopheles albimanus
AALB005825
I
0.772
AARA000223
Anopheles arabiensis
AARA000223
I
0.783
AARA005739
Anopheles arabiensis
AARA005739
I
0.772
AATE004171
Anopheles atroparvus
AATE004171
I
0.772
AATE007373
Anopheles atroparvus
AATE007373
I
0.779
ACOM032922
Anopheles coluzzii
ACOM032922
I
0.783
ACOM038853
Anopheles coluzzii
ACOM038853
I
0.772
ACUA018233
Anopheles culicifacies
ACUA018233
I
0.772
ACUA021013
Anopheles culicifacies
ACUA021013
I
0.783
ADIR006100
Anopheles dirus
ADIR006100
I
0.783
ADIR006902
Anopheles dirus
ADIR006902
I
0.772
AEPI006447
Anopheles epiroticus
AEPI006447
I
0.772
AFAF014224
Anopheles farauti
AFAF014224
I
0.783
AFAF020685
Anopheles farauti
AFAF020685
I
0.772
AFUN005214
Anopheles funestus
AFUN005214
I
0.783
AFUN015735
Anopheles funestus
AFUN015735
I
0.772
AMAM013893
Anopheles maculatus
AMAM013893
I
0.783
AMEC007553
Anopheles melas
AMEC007553
I
0.783
AMEC020579
Anopheles melas
AMEC020579
I
0.772
AMEM005377
Anopheles merus
AMEM005377
I
0.783
AMEM007731
Anopheles merus
AMEM007731
I
0.772
AMIN001798
Anopheles minimus
AMIN001798
I
0.783
AMIN010170
Anopheles minimus
AMIN010170
I
0.772
AQUA007907
Anopheles quadriannulatus
AQUA007907
I
0.783
AQUA011201
Anopheles quadriannulatus
AQUA011201
I
0.772
ASIS011483
Anopheles sinensis
ASIS011483
I
0.779
ASTEI02251
Anopheles stephensi
ASTEI02251
I
0.772
ASTEI07347
Anopheles stephensi
ASTEI07347
I
0.783
BGLB014127
Biomphalaria glabrata
BGLB014127
I
0.794
LLOJ003991
Lutzomyia longipalpis
LLOJ003991
I
0.783
MDOA003989
Musca domestica
MDOA003989
I
0.773
MDOA005562
Musca domestica
MDOA005562
I
0.790
PPAI007467
Phlebotomus papatasi
PPAI007467
I
0.783
BXY_0653800
Bursaphelenchus xylophilus
BXY_0653800
I
0.798
D917_03517
Trichinella nativa
D917_03517
I
0.777
D918_09272
Trichuris suis
D918_09272
I
0.777
L596_g13054
Steinernema carpocapsae
L596_g13054
I
0.781
L889_g28721
Steinernema feltiae
L889_g28721
I
0.767
L898_g33279
Steinernema monticolum
L898_g33279
I
0.781
nAv.1.0.1.g07165
Acanthocheilonema viteae
nAv.1.0.1.g07165
I
0.752
OESDEN_03668
Oesophagostomum dentatum
OESDEN_03668
I
0.748
PTRK_0000026300
Parastrongyloides trichosuri
PTRK_0000026300
I
0.764
RSKR_0000016900
Rhabditophanes kr3021
RSKR_0000016900
I
0.786
SBAD_0000916601
Soboliphyme baturini
SBAD_0000916601
I
0.788
scaffold450-EXSNAP2012.9
Pristionchus exspectatus
scaffold450-EXSNAP2012.9
I
0.788
TMUE_s0009010400
Trichuris muris
TMUE_s0009010400
I
0.777
TTRE_0000109401
Trichuris trichiura
TTRE_0000109401
I
0.777