Sakowv30005160m.g (Saccoglossus kowalevskii)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 Sakowv30005160m.g T307035_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q6VU64_APLCA
M02423_2.00 		Aplysia californica
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6055 		0.757 0.457
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23922386_peptide Nuclear receptor 47 116

Links

Other Nuclear receptor family TFs
Other Saccoglossus kowalevskii TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPU_004526 Strongylocentrotus purpuratus SPU_004526 I 0.978
Sakowv30039583m.g Saccoglossus kowalevskii Sakowv30039583m.g N 0.887
Sakowv30014378m.g Saccoglossus kowalevskii Sakowv30014378m.g I 0.850
Nr1h5 Rattus norvegicus ENSRNOG00000023073 I 0.849
Ocbimv22026489m.g Octopus bimaculoides Ocbimv22026489m.g I 0.839
SPU_015456 Strongylocentrotus purpuratus SPU_015456 I 0.807
HelroG108893 Helobdella robusta HelroG108893 I 0.802
SPU_017404 Strongylocentrotus purpuratus SPU_017404 N 0.782
LotgiG132166 Lottia gigantea LotgiG132166 I 0.762
CGI_10024100 Crassostrea gigas CGI_10024100 I 0.757
Q6VU64_APLCA Aplysia californica Q6VU64_APLCA D 0.757
Ocbimv22000656m.g Octopus bimaculoides Ocbimv22000656m.g I 0.757
BGLB011780 Biomphalaria glabrata BGLB011780 I 0.757
ENSLAFG00000028744 Loxodonta africana ENSLAFG00000028744 I 0.753