CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30039583m.g
(
Saccoglossus kowalevskii
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Sakowv30039583m.g
T307061_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23924286_peptide
Nuclear receptor
19
90
KCCVVCGDHANGLHYKVMSCEGCKTFFRRNVQHREKLKCEMDTGGACEMDLFTRRQCPACRMRKCLDSGMQI
23924287_peptide
Nuclear receptor
14
85
KCCVVCGDHANGLHYKVMSCEGCKTFFRRNVQHREKLKCEMDTGGACEMDLFTRRQCPACRMRKCLDSGMQI
23924288_peptide
Nuclear receptor
14
85
KCCVVCGDHANGLHYKVMSCEGCKTFFRRNVQHREKLKCEMDTGGACEMDLFTRRQCPACRMRKCLDSGMQI
23924289_peptide
Nuclear receptor
14
85
KCCVVCGDHANGLHYKVMSCEGCKTFFRRNVQHREKLKCEMDTGGACEMDLFTRRQCPACRMRKCLDSGMQI
Links
Other
Nuclear receptor
family TFs
Other
Saccoglossus kowalevskii
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPU_017404
Strongylocentrotus purpuratus
SPU_017404
N
0.904
SPU_004526
Strongylocentrotus purpuratus
SPU_004526
I
0.889
Sakowv30005160m.g
Saccoglossus kowalevskii
Sakowv30005160m.g
I
0.887