CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-50
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003640
T306164_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C06C6.5a
Nuclear receptor
1
67
MACQVCGCSDVEPHFGALSCRACAAFFRRYFHSKKVVGQCNCAVRFRNSHPCRECRIKKCLSIGMNP
C06C6.5b.1
Nuclear receptor
1
67
MACQVCGCSDVEPHFGALSCRACAAFFRRYFHSKKVVGQCNCAVRFRNSHPCRECRIKKCLSIGMNP
C06C6.5b.2
Nuclear receptor
1
67
MACQVCGCSDVEPHFGALSCRACAAFFRRYFHSKKVVGQCNCAVRFRNSHPCRECRIKKCLSIGMNP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LEMA_P068760.1
Leptosphaeria maculans
LEMA_P068760.1
N
W97_06595
Coniosporium apollinis
W97_06595
N
UREG_01776
Uncinocarpus reesii
UREG_01776
N
TRV_05783
Trichophyton verrucosum
TRV_05783
N
TESG_07504
Trichophyton tonsurans
TESG_07504
N
SNOG_00035
Phaeosphaeria nodorum
SNOG_00035
N
PTT_19449
Pyrenophora teres
PTT_19449
N
PTRG_10664
Pyrenophora triticirepentis
PTRG_10664
N
MPH_09751
Macrophomina phaseolina
MPH_09751
N
MGYG_06074
Microsporum gypseum
MGYG_06074
N
MCYG_05897
Arthroderma otae
MCYG_05897
N
CIMG_04570
Coccidioides immitis
CIMG_04570
N
H101_06292
Trichophyton interdigitale
H101_06292
N
CPC735_072200
Coccidioides posadasii
CPC735_072200
N
COCVIDRAFT_83291
Bipolaris victoriae
COCVIDRAFT_83291
N
COCSADRAFT_166441
Bipolaris sorokiniana
COCSADRAFT_166441
N
COCMIDRAFT_102605
Bipolaris oryzae
COCMIDRAFT_102605
N
COCCADRAFT_39022
Bipolaris zeicola
COCCADRAFT_39022
N
COCC4DRAFT_183321
Bipolaris maydis
COCC4DRAFT_183321
N
ARB_04494
Arthroderma benhamiae
ARB_04494
N
SNOG_00035
Stagonospora nodorum
SNOG_00035
N
MCYG_05897
Microsporum canis
MCYG_05897
N