CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-50
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003640
T306164_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C06C6.5a
Nuclear receptor
1
67
MACQVCGCSDVEPHFGALSCRACAAFFRRYFHSKKVVGQCNCAVRFRNSHPCRECRIKKCLSIGMNP
C06C6.5b.1
Nuclear receptor
1
67
MACQVCGCSDVEPHFGALSCRACAAFFRRYFHSKKVVGQCNCAVRFRNSHPCRECRIKKCLSIGMNP
C06C6.5b.2
Nuclear receptor
1
67
MACQVCGCSDVEPHFGALSCRACAAFFRRYFHSKKVVGQCNCAVRFRNSHPCRECRIKKCLSIGMNP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nhr-63
Caenorhabditis elegans
WBGene00003653
N
0.933
CBG17072
Caenorhabditis briggsae
CBG17072
N
0.869
CRE08638
Caenorhabditis remanei
CRE08638
N
0.858
CRE08639
Caenorhabditis remanei
CRE08639
N
0.826
CRE08640
Caenorhabditis remanei
CRE08640
N
0.803
CRE08644
Caenorhabditis remanei
CRE08644
N
0.794
nhr-139
Caenorhabditis elegans
WBGene00016365
N
0.782