CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-71
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003661
T306185_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
K11E4.5a
Nuclear receptor
8
77
QECMVCSAPADGLHYGAISCRSCNAFFRRTVVEKAEYRCKHTNTCLIDPDGRCACRSCRFTKCIEAGMKI
K11E4.5b
Nuclear receptor
8
80
QECMVCSAPADGLHYGAISCRSCNAFFRRTVVEKALFQEYRCKHTNTCLIDPDGRCACRSCRFTKCIEAGMKI
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RSKR_0000406200
Rhabditophanes kr3021
RSKR_0000406200
N
L596_g18692
Steinernema carpocapsae
L596_g18692
N
0.871
L892_g2121
Steinernema scapterisci
L892_g2121
N
0.871
L892_g23809
Steinernema scapterisci
L892_g23809
N
L893_g13248
Steinernema glaseri
L893_g13248
N
L893_g20500
Steinernema glaseri
L893_g20500
N
0.868
MhA1_Contig194.frz3.gene8
Meloidogyne hapla
MhA1_Contig194.frz3.gene8
N
NECAME_02646
Necator americanus
NECAME_02646
N
nOo.2.0.1.g08044
Onchocerca ochengi
nOo.2.0.1.g08044
N
PTRK_0000018500
Parastrongyloides trichosuri
PTRK_0000018500
N
L596_g18686
Steinernema carpocapsae
L596_g18686
N
0.756
scaffold429-EXSNAP2012.6
Pristionchus exspectatus
scaffold429-EXSNAP2012.6
N
0.896
scaffold50-EXSNAP2012.1
Pristionchus exspectatus
scaffold50-EXSNAP2012.1
N
0.770
SMUV_0001020501
Syphacia muris
SMUV_0001020501
N
SPAL_0000159200
Strongyloides papillosus
SPAL_0000159200
N
SSTP_0000308900
Strongyloides stercoralis
SSTP_0000308900
N
SVE_1011400
Strongyloides venezuelensis
SVE_1011400
N
TCLT_0000508901
Thelazia callipaeda
TCLT_0000508901
N
TCNE_0000967201
Toxocara canis
TCNE_0000967201
N
ANCCEY_02206
Ancylostoma ceylanicum
ANCCEY_02206
N
CBG05270
Caenorhabditis briggsae
CBG05270
N
CBN30611
Caenorhabditis brenneri
CBN30611
N
CJA10118
Caenorhabditis japonica
CJA10118
N
CRE19235
Caenorhabditis remanei
CRE19235
N
LOAG_12834
Loa loa
LOAG_12834
N
0.759
nhr-32
Caenorhabditis elegans
WBGene00003626
N
WBGene00239074
Onchocerca volvulus
WBGene00239074
N
Minc11538
Meloidogyne incognita
Minc11538
N
WUBG_12380
Wuchereria bancrofti
WUBG_12380
N
ANCDUO_19443
Ancylostoma duodenale
ANCDUO_19443
N
ASU_09640
Ascaris suum
ASU_09640
N
augustus_masked-nMf.1.1.scaf06448-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf06448-processed-gene-0.0
N
BTMF_0000954001
Brugia timori
BTMF_0000954001
N
BXY_0332200
Bursaphelenchus xylophilus
BXY_0332200
N
GPLIN_000607300
Globodera pallida
GPLIN_000607300
N
0.932
GPLIN_000663400
Globodera pallida
GPLIN_000663400
N
0.932
GPUH_0002529501
Gongylonema pulchrum
GPUH_0002529501
N