CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACAC_0001180201
(
Angiostrongylus cantonensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ACAC_0001180201
T307905_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-3
M00687_2.00
Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN
PBM
Narasimhan et al.(2015)
pTH9163
0.893
0.657
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.809
0.600
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACAC_0001180201-mRNA-1
Nuclear receptor
25
94
GVCMVCGDRSAGKHYGVMACYGCKGFFRRTIRSGQNYSCRFQRKCSIDKDQRNACRFCRFQRCLNVGMEP
Links
Other
Nuclear receptor
family TFs
Other
Angiostrongylus cantonensis
TFs
187 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LYS14
Saccharomyces cerevisiae
YDR034C
D
TBLA_0I01890
Tetrapisispora blattae
TBLA_0I01890
I
SAKL0D03586g
Lachancea kluyveri
SAKL0D03586g
I
3859_YDR034C
Saccharomyces paradoxus
3859_YDR034C
I
3344_Multiple
Saccharomyces mikatae
3344_Multiple
I
21342_YDR034C
Saccharomyces bayanus
21342_YDR034C
I
ZYRO0A03058g
Zygosaccharomyces rouxii
ZYRO0A03058g
I
ZBAI_06624
Zygosaccharomyces bailii
ZBAI_06624
I
ZBAI_04585
Zygosaccharomyces bailii
ZBAI_04585
I
TPHA_0M01040
Tetrapisispora phaffii
TPHA_0M01040
I
AACERI_AaceriABL099W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriABL099W
I
SU7_0595
Saccharomyces arboricola
SU7_0595
I
SKUD_203807
Saccharomyces kudriavzevii
SKUD_203807
I
NDAI_0A05750
Naumovozyma dairenensis
NDAI_0A05750
I
Kpol_1061p11
Vanderwaltozyma polyspora
Kpol_1061p11
I
KNAG_0H01260
Kazachstania naganishii
KNAG_0H01260
I
KAFR_0E01250
Kazachstania africana
KAFR_0E01250
I
Ecym_5131
Eremothecium cymbalariae
Ecym_5131
I
CAGL0K11902g
Candida glabrata
CAGL0K11902g
I