augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 T308227_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.976 0.773
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.967 0.576
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0-mRNA-1 Nuclear receptor 1 66

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CpipJ_CPIJ015184 Culex pipiens CpipJ_CPIJ015184 N