CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hba_14958
(
Heterorhabditis bacteriophora
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Hba_14958
T308748_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.867
0.600
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hba_14958
Nuclear receptor
31
100
DTCRVCGDGNAKMHYGVVTCFGCKGFFRRTLKRPTEYQCRHNGTCVVDRHERNSCRYCRFKKCIEVGMDP
Links
Other
Nuclear receptor
family TFs
Other
Heterorhabditis bacteriophora
TFs
146 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.scaffold_191000049
Physcomitrella patens
fgenesh1_pg.scaffold_191000049
D
estExt_fgenesh1_pg.C_3030026
Physcomitrella patens
estExt_fgenesh1_pg.C_3030026
I
estExt_fgenesh1_pg.C_330060
Physcomitrella patens
estExt_fgenesh1_pg.C_330060
I
estExt_fgenesh1_pg.C_4070009
Physcomitrella patens
estExt_fgenesh1_pg.C_4070009
I
fgenesh2_pg.scaffold_78000088
Physcomitrella patens
fgenesh2_pg.scaffold_78000088
I