HCOI00626200 (Haemonchus contortus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HCOI00626200 T308782_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-5
M00688_2.00 		Caenorhabditis elegans
NNRWGTACRSNN
NNSYGTACWYNN		 PBM
Narasimhan et al.(2015)
pTH10042 		0.942 0.714
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00626200.t1 Nuclear receptor 47 116
HCOI00626200.t2 Nuclear receptor 47 116
HCOI00626200.t3 Nuclear receptor 47 116

Links

Other Nuclear receptor family TFs
Other Haemonchus contortus TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-5 Caenorhabditis elegans WBGene00003604 D 0.942
CBG13722 Caenorhabditis briggsae CBG13722 I 0.940
CBN16692 Caenorhabditis brenneri CBN16692 I 0.929
CRE15100 Caenorhabditis remanei CRE15100 I 0.929
CRE20968 Caenorhabditis remanei CRE20968 I 0.929
ANCCEY_03917 Ancylostoma ceylanicum ANCCEY_03917 I 0.982
Hba_07236 Heterorhabditis bacteriophora Hba_07236 I 0.880
NECAME_16756 Necator americanus NECAME_16756 I 0.982
ANCCAN_07626 Ancylostoma caninum ANCCAN_07626 N 0.747
DICVIV_13289 Dictyocaulus viviparus DICVIV_13289 N 0.766
DICVIV_13591 Dictyocaulus viviparus DICVIV_13591 N 0.847
TELCIR_14033 Teladorsagia circumcincta TELCIR_14033 N 0.762