CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE20968
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE20968
T302244_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-5
M00688_2.00
Caenorhabditis elegans
NNRWGTACRSNN
NNSYGTACWYNN
PBM
Narasimhan et al.(2015)
pTH10042
0.976
0.957
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE20968
Nuclear receptor
41
110
NLCRVCGAEKAAHHYGALSCVGCKGFFRRALLKADQLECAANGECTVSVLQKIQCRSCRFNKCLREGMNP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN16692
Caenorhabditis brenneri
CBN16692
I
0.980
CRE15100
Caenorhabditis remanei
CRE15100
I
0.980
CBG13722
Caenorhabditis briggsae
CBG13722
I
0.976
nhr-5
Caenorhabditis elegans
WBGene00003604
D
0.976
ANCCEY_03917
Ancylostoma ceylanicum
ANCCEY_03917
I
0.929
HCOI00626200
Haemonchus contortus
HCOI00626200
I
0.929
NECAME_16756
Necator americanus
NECAME_16756
I
0.929