CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0002162901
(
Heligmosomoides bakeri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
HPBE_0002162901
T308880_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0002162901-mRNA-1
Nuclear receptor
36
90
RNCVVCGDRACSHLYYGVAACHGCKCFFWRTVKSGLSYSCRFDGRCSISTGYQRL
Links
Other
Nuclear receptor
family TFs
Other
Heligmosomoides bakeri
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN08571
Caenorhabditis brenneri
CBN08571
I
0.910
CBN10811
Caenorhabditis brenneri
CBN10811
I
0.910
CBG15006
Caenorhabditis briggsae
CBG15006
I
0.910
CRE09911
Caenorhabditis remanei
CRE09911
I
0.910
CRE14116
Caenorhabditis remanei
CRE14116
I
0.910
SVE_0662100
Strongyloides venezuelensis
SVE_0662100
I
0.784
SSTP_0000433200
Strongyloides stercoralis
SSTP_0000433200
I
0.804
SPAL_0001690000
Strongyloides papillosus
SPAL_0001690000
I
0.784
PTRK_0000785300
Parastrongyloides trichosuri
PTRK_0000785300
I
0.784
SVUK_0000487901
Strongylus vulgaris
SVUK_0000487901
N
0.932
RSKR_0000862400
Rhabditophanes kr3021
RSKR_0000862400
N
0.839
OESDEN_16690
Oesophagostomum dentatum
OESDEN_16690
N
0.932
HCOI02064100
Haemonchus contortus
HCOI02064100
N
0.928
HCOI02063800
Haemonchus contortus
HCOI02063800
N
0.928
HCOI02063400
Haemonchus contortus
HCOI02063400
N
0.928
HCOI02063200
Haemonchus contortus
HCOI02063200
N
0.928
HCOI02063000
Haemonchus contortus
HCOI02063000
N
0.928
HCOI00878400
Haemonchus contortus
HCOI00878400
N
0.928
ANCDUO_22516
Ancylostoma duodenale
ANCDUO_22516
N
0.933
nhr-97
Caenorhabditis elegans
WBGene00003687
N
0.910
CJA03362
Caenorhabditis japonica
CJA03362
N
0.910