CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI00878400
(
Haemonchus contortus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
HCOI00878400
T308787_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI00878400.t1
Nuclear receptor
33
103
ALCVVCGDRACSHLYYGVAACHGCKCFFWRTVKSGLSYSCRFDGRCSISTAGRNACRYCRFNRCLKSGMKL
Links
Other
Nuclear receptor
family TFs
Other
Haemonchus contortus
TFs
88 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI02063000
Haemonchus contortus
HCOI02063000
N
0.996
HCOI02063200
Haemonchus contortus
HCOI02063200
N
0.996
HCOI02063400
Haemonchus contortus
HCOI02063400
N
0.996
HCOI02063800
Haemonchus contortus
HCOI02063800
N
0.996
HCOI02064100
Haemonchus contortus
HCOI02064100
N
0.996
CBG15006
Caenorhabditis briggsae
CBG15006
I
0.994
CBN08571
Caenorhabditis brenneri
CBN08571
I
0.994
CBN10811
Caenorhabditis brenneri
CBN10811
I
0.994
CRE09911
Caenorhabditis remanei
CRE09911
I
0.994
CRE14116
Caenorhabditis remanei
CRE14116
I
0.994
nhr-97
Caenorhabditis elegans
WBGene00003687
N
0.994
CJA03362
Caenorhabditis japonica
CJA03362
N
0.993
RSKR_0000862400
Rhabditophanes kr3021
RSKR_0000862400
N
0.979
SSTP_0000433200
Strongyloides stercoralis
SSTP_0000433200
I
0.976
SPAL_0001690000
Strongyloides papillosus
SPAL_0001690000
I
0.975
SVE_0662100
Strongyloides venezuelensis
SVE_0662100
I
0.975
PTRK_0000785300
Parastrongyloides trichosuri
PTRK_0000785300
I
0.973
ASIM_0000041701
Anisakis simplex
ASIM_0000041701
N
0.939
HPBE_0002162901
Heligmosomoides bakeri
HPBE_0002162901
N
0.928
ANCDUO_22516
Ancylostoma duodenale
ANCDUO_22516
N
0.924
OESDEN_16690
Oesophagostomum dentatum
OESDEN_16690
N
0.923
SVUK_0000487901
Strongylus vulgaris
SVUK_0000487901
N
0.923
TCNE_0000088101
Toxocara canis
TCNE_0000088101
N
0.923
BXY_0179600
Bursaphelenchus xylophilus
BXY_0179600
I
0.918
L596_g25326
Steinernema carpocapsae
L596_g25326
N
0.890
L889_g23169
Steinernema feltiae
L889_g23169
N
0.890
L892_g27553
Steinernema scapterisci
L892_g27553
N
0.890
L893_g2097
Steinernema glaseri
L893_g2097
N
0.890
L898_g11980
Steinernema monticolum
L898_g11980
N
0.890
CBG19604
Caenorhabditis briggsae
CBG19604
I
0.882
CJA04720
Caenorhabditis japonica
CJA04720
I
0.882
CBN07936
Caenorhabditis brenneri
CBN07936
I
0.876
CBN20828
Caenorhabditis brenneri
CBN20828
I
0.876
CRE06667
Caenorhabditis remanei
CRE06667
I
0.876
nhr-88
Caenorhabditis elegans
WBGene00003678
I
0.876
HCOI01268300
Haemonchus contortus
HCOI01268300
I
0.876
NBR_0000170601
Nippostrongylus brasiliensis
NBR_0000170601
I
0.876
GPLIN_000686000
Globodera pallida
GPLIN_000686000
N
0.867
WUBG_10752
Wuchereria bancrofti
WUBG_10752
I
0.851
Bm12053
Brugia malayi
Bm12053
I
0.851
Bm4894
Brugia malayi
Bm4894
I
0.851
LOAG_05485
Loa loa
LOAG_05485
I
0.851
WBGene00248075
Onchocerca volvulus
WBGene00248075
I
0.851
BTMF_0001198801
Brugia timori
BTMF_0001198801
I
0.851
GPUH_0000393501
Gongylonema pulchrum
GPUH_0000393501
I
0.851
nAv.1.0.1.g01698
Acanthocheilonema viteae
nAv.1.0.1.g01698
I
0.851
nDi.2.2.2.g02781
Dirofilaria immitis
nDi.2.2.2.g02781
I
0.851
nLs.2.1.2.g08709
Litomosoides sigmodontis
nLs.2.1.2.g08709
I
0.851
nOo.2.0.1.g04046
Onchocerca ochengi
nOo.2.0.1.g04046
I
0.851
OFLC_0001511801
Onchocerca flexuosa
OFLC_0001511801
I
0.851
TCLT_0000173501
Thelazia callipaeda
TCLT_0000173501
I
0.851
ACAC_0001180201
Angiostrongylus cantonensis
ACAC_0001180201
I
0.844
ANCCAN_12539
Ancylostoma caninum
ANCCAN_12539
I
0.844
DME_0000960901
Dracunculus medinensis
DME_0000960901
I
0.844
Hba_14163
Heterorhabditis bacteriophora
Hba_14163
I
0.844
NECAME_05125
Necator americanus
NECAME_05125
I
0.844
OESDEN_17109
Oesophagostomum dentatum
OESDEN_17109
I
0.844
Minc11986
Meloidogyne incognita
Minc11986
I
0.842
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1
I
0.842
L893_g6878
Steinernema glaseri
L893_g6878
I
0.837
Minc15420
Meloidogyne incognita
Minc15420
I
0.816
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
I
0.816
L596_g27086
Steinernema carpocapsae
L596_g27086
I
0.806
L889_g29204
Steinernema feltiae
L889_g29204
I
0.797
L898_g4801
Steinernema monticolum
L898_g4801
I
0.797
PTRK_0000775900
Parastrongyloides trichosuri
PTRK_0000775900
I
0.791
SPAL_0001157400
Strongyloides papillosus
SPAL_0001157400
I
0.791
SSTP_0000217700
Strongyloides stercoralis
SSTP_0000217700
I
0.791
SVE_1633700
Strongyloides venezuelensis
SVE_1633700
I
0.791
PPA21285
Pristionchus pacificus
PPA21285
I
0.788
scaffold51-EXSNAP2012.23
Pristionchus exspectatus
scaffold51-EXSNAP2012.23
I
0.788
SPAL_0000620000
Strongyloides papillosus
SPAL_0000620000
I
0.772
SSTP_0000662400
Strongyloides stercoralis
SSTP_0000662400
I
0.772
SVE_1965700
Strongyloides venezuelensis
SVE_1965700
I
0.772
ANCCAN_03474
Ancylostoma caninum
ANCCAN_03474
I
0.766
DICVIV_10822
Dictyocaulus viviparus
DICVIV_10822
I
0.766
Hba_06510
Heterorhabditis bacteriophora
Hba_06510
I
0.766
HCOI01716000
Haemonchus contortus
HCOI01716000
I
0.766
HPLM_0001092501
Haemonchus placei
HPLM_0001092501
I
0.766
NBR_0001013001
Nippostrongylus brasiliensis
NBR_0001013001
I
0.766
OESDEN_12257
Oesophagostomum dentatum
OESDEN_12257
I
0.766
PTRK_0000207700
Parastrongyloides trichosuri
PTRK_0000207700
I
0.766
CBN13729
Caenorhabditis brenneri
CBN13729
I
0.764
SPU_019332
Strongylocentrotus purpuratus
SPU_019332
I
0.763
LotgiG68173
Lottia gigantea
LotgiG68173
I
0.755
ACYPI005934
Acyrthosiphon pisum
ACYPI005934
I
0.752
Sakowv30008100m.g
Saccoglossus kowalevskii
Sakowv30008100m.g
I
0.749
nRc.2.0.1.g17592
Romanomermis culicivorax
nRc.2.0.1.g17592
I
0.745