PPA21285 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA21285 T305911_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.875 0.629
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.852 0.586
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA21285 Nuclear receptor 15 84

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.995
CBG19604 Caenorhabditis briggsae CBG19604 I 0.990
CBN07936 Caenorhabditis brenneri CBN07936 I 0.990
CBN20828 Caenorhabditis brenneri CBN20828 I 0.990
CJA04720 Caenorhabditis japonica CJA04720 I 0.990
CRE06667 Caenorhabditis remanei CRE06667 I 0.990
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.990
L893_g6878 Steinernema glaseri L893_g6878 I 0.990
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.989
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.989
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.988
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.987
Bm12053 Brugia malayi Bm12053 I 0.987
Bm4894 Brugia malayi Bm4894 I 0.987
LOAG_05485 Loa loa LOAG_05485 I 0.987
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.987
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.987
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.987
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.987
L889_g29204 Steinernema feltiae L889_g29204 I 0.987
L898_g4801 Steinernema monticolum L898_g4801 I 0.987
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.987
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.987
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.987
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.987
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.987
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.987
Minc15420 Meloidogyne incognita Minc15420 I 0.986
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.986
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.986
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.986
NECAME_05125 Necator americanus NECAME_05125 I 0.986
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.986
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.986
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I 0.986
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.986
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.986
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.986
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.979
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I 0.966
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I 0.966
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I 0.966
Bm2389 Brugia malayi Bm2389 I 0.961
CJA08328 Caenorhabditis japonica CJA08328 I 0.961
CRE02711 Caenorhabditis remanei CRE02711 I 0.961
CRE10161 Caenorhabditis remanei CRE10161 I 0.961
LOAG_01074 Loa loa LOAG_01074 I 0.961
Ppa-nhr-31 Pristionchus pacificus PPA24219 I 0.961
nhr-31 Caenorhabditis elegans WBGene00003625 I 0.961
ASU_04305 Ascaris suum ASU_04305 I 0.961
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I 0.961
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I 0.961
DME_0000188101 Dracunculus medinensis DME_0000188101 I 0.959
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I 0.958
WBGene00241236 Onchocerca volvulus WBGene00241236 I 0.955
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I 0.954
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I 0.954
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I 0.954
HCOI01716000 Haemonchus contortus HCOI01716000 I 0.954
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I 0.954
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I 0.954
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I 0.954
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I 0.954
CBN13729 Caenorhabditis brenneri CBN13729 I 0.952
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I 0.951
SMUV_0000212501 Syphacia muris SMUV_0000212501 I 0.951
CBG17744 Caenorhabditis briggsae CBG17744 I 0.945
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I 0.939
L596_g3809 Steinernema carpocapsae L596_g3809 I 0.937
L889_g8621 Steinernema feltiae L889_g8621 I 0.937
L893_g27201 Steinernema glaseri L893_g27201 I 0.937
L898_g2799 Steinernema monticolum L898_g2799 I 0.937
GPLIN_001106000 Globodera pallida GPLIN_001106000 I 0.920
nOo.2.0.1.g02048 Onchocerca ochengi nOo.2.0.1.g02048 N 0.913
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.903
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.895
ANCCAN_09370 Ancylostoma caninum ANCCAN_09370 N 0.892
CBN18797 Caenorhabditis brenneri CBN18797 I 0.888
CBN26258 Caenorhabditis brenneri CBN26258 I 0.888
RSKR_0000868400 Rhabditophanes kr3021 RSKR_0000868400 N 0.888
augustus_masked-nMf.1.1.scaf06891-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06891-processed-gene-0.0 N 0.887
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.883
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.879
CBG07552 Caenorhabditis briggsae CBG07552 I 0.875
CRE15289 Caenorhabditis remanei CRE15289 I 0.875
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.875
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.873
CBN19233 Caenorhabditis brenneri CBN19233 I 0.872
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.871
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.870
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.869
Bm14724 Brugia malayi Bm14724 I 0.869
LOAG_18352 Loa loa LOAG_18352 I 0.869
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.869
ASU_10946 Ascaris suum ASU_10946 I 0.869
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.869
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.869
L892_g650 Steinernema scapterisci L892_g650 I 0.869
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.869
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.869
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.869
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.869
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.869
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.868
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.868
NECAME_04545 Necator americanus NECAME_04545 I 0.868
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.868
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.868
PPA20304 Pristionchus pacificus PPA20304 I 0.866
L893_g29555 Steinernema glaseri L893_g29555 I 0.865
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.865
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.865
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.865
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.865
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.864
CJA13646 Caenorhabditis japonica CJA13646 I 0.863
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.860
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.860
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.860
CBG19594 Caenorhabditis briggsae CBG19594 I 0.853
CBN31048 Caenorhabditis brenneri CBN31048 I 0.853
CRE06661 Caenorhabditis remanei CRE06661 I 0.853
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.853
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.853
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.853
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.853
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.853
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.853
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.853
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.853
NECAME_12696 Necator americanus NECAME_12696 I 0.853
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.853
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.853
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.853
CBG06052 Caenorhabditis briggsae CBG06052 I 0.852
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.852
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.849
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.848
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.847
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.847
CRE12779 Caenorhabditis remanei CRE12779 I 0.845
ASU_01199 Ascaris suum ASU_01199 I 0.841
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.838
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.833
Minc01725 Meloidogyne incognita Minc01725 I 0.830
Minc13525 Meloidogyne incognita Minc13525 I 0.830
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.830
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.830
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.830
L889_g8361 Steinernema feltiae L889_g8361 I 0.829
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.828
L898_g10316 Steinernema monticolum L898_g10316 I 0.828
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.826
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.823
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.823
L889_g5777 Steinernema feltiae L889_g5777 I 0.823
L893_g29388 Steinernema glaseri L893_g29388 I 0.823
L898_g24498 Steinernema monticolum L898_g24498 I 0.823
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.816
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.816
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.816
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.814
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.797
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.793
HCOI00878400 Haemonchus contortus HCOI00878400 N 0.788
HCOI02063000 Haemonchus contortus HCOI02063000 N 0.788
HCOI02063200 Haemonchus contortus HCOI02063200 N 0.788
HCOI02063400 Haemonchus contortus HCOI02063400 N 0.788
HCOI02063800 Haemonchus contortus HCOI02063800 N 0.788
HCOI02064100 Haemonchus contortus HCOI02064100 N 0.788
ASIM_0001301101 Anisakis simplex ASIM_0001301101 I 0.784
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I 0.777
CBN08571 Caenorhabditis brenneri CBN08571 I 0.774
CBN10811 Caenorhabditis brenneri CBN10811 I 0.774
CBG01439 Caenorhabditis briggsae CBG01439 N 0.772
PTRK_0000861400 Parastrongyloides trichosuri PTRK_0000861400 I 0.772
BXY_0179600 Bursaphelenchus xylophilus BXY_0179600 I 0.770
CBG15006 Caenorhabditis briggsae CBG15006 I 0.757
CRE09911 Caenorhabditis remanei CRE09911 I 0.757
CRE14116 Caenorhabditis remanei CRE14116 I 0.757
Minc11986 Meloidogyne incognita Minc11986 I 0.757
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1 I 0.757
nhr-97 Caenorhabditis elegans WBGene00003687 N 0.755
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I 0.753
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.753
SBAD_0000391501 Soboliphyme baturini SBAD_0000391501 I 0.752