CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf06891-processed-gene-0.0
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
augustus_masked-nMf.1.1.scaf06891-processed-gene-0.0
T308209_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf06891-processed-gene-0.0-mRNA-1
Nuclear receptor
1
53
MACYGCKGFFRRTIRSKQSYNCRFQKRCSIDKDQRNACRFCRFQRCLQVGMEV
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc15420
Meloidogyne incognita
Minc15420
I
0.917
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
I
0.917
L596_g27086
Steinernema carpocapsae
L596_g27086
I
0.905
WUBG_10752
Wuchereria bancrofti
WUBG_10752
I
0.905
BTMF_0001198801
Brugia timori
BTMF_0001198801
I
0.905
nAv.1.0.1.g01698
Acanthocheilonema viteae
nAv.1.0.1.g01698
I
0.905
nLs.2.1.2.g08709
Litomosoides sigmodontis
nLs.2.1.2.g08709
I
0.905
TCLT_0000173501
Thelazia callipaeda
TCLT_0000173501
I
0.905
OFLC_0001511801
Onchocerca flexuosa
OFLC_0001511801
I
0.905
nOo.2.0.1.g04046
Onchocerca ochengi
nOo.2.0.1.g04046
I
0.905
WBGene00248075
Onchocerca volvulus
WBGene00248075
I
0.905
nDi.2.2.2.g02781
Dirofilaria immitis
nDi.2.2.2.g02781
I
0.905
GPUH_0000393501
Gongylonema pulchrum
GPUH_0000393501
I
0.905
LOAG_05485
Loa loa
LOAG_05485
I
0.905
Bm4894
Brugia malayi
Bm4894
I
0.905
Bm12053
Brugia malayi
Bm12053
I
0.905
DME_0000960901
Dracunculus medinensis
DME_0000960901
I
0.902
ACAC_0001180201
Angiostrongylus cantonensis
ACAC_0001180201
I
0.902
NECAME_05125
Necator americanus
NECAME_05125
I
0.900
L889_g29204
Steinernema feltiae
L889_g29204
I
0.900
OESDEN_17109
Oesophagostomum dentatum
OESDEN_17109
I
0.900
Hba_14163
Heterorhabditis bacteriophora
Hba_14163
I
0.900
L898_g4801
Steinernema monticolum
L898_g4801
I
0.900
ANCCAN_09370
Ancylostoma caninum
ANCCAN_09370
N
0.900
ANCCAN_12539
Ancylostoma caninum
ANCCAN_12539
I
0.900
PTRK_0000775900
Parastrongyloides trichosuri
PTRK_0000775900
I
0.897
SVE_1633700
Strongyloides venezuelensis
SVE_1633700
I
0.897
SPAL_0001157400
Strongyloides papillosus
SPAL_0001157400
I
0.897
SSTP_0000217700
Strongyloides stercoralis
SSTP_0000217700
I
0.897
scaffold51-EXSNAP2012.23
Pristionchus exspectatus
scaffold51-EXSNAP2012.23
I
0.887
PPA21285
Pristionchus pacificus
PPA21285
I
0.887
CBG19604
Caenorhabditis briggsae
CBG19604
I
0.886
CJA04720
Caenorhabditis japonica
CJA04720
I
0.886
L893_g6878
Steinernema glaseri
L893_g6878
I
0.881
CRE06667
Caenorhabditis remanei
CRE06667
I
0.881
HCOI01268300
Haemonchus contortus
HCOI01268300
I
0.881
CBN07936
Caenorhabditis brenneri
CBN07936
I
0.881
nhr-88
Caenorhabditis elegans
WBGene00003678
I
0.881
NBR_0000170601
Nippostrongylus brasiliensis
NBR_0000170601
I
0.881
CBN20828
Caenorhabditis brenneri
CBN20828
I
0.881
BXY_1595900
Bursaphelenchus xylophilus
BXY_1595900
I
0.843
CBG17744
Caenorhabditis briggsae
CBG17744
I
0.754