snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 T310465_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.885 0.657
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.782 0.586
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.745 0.643
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3-mRNA-1 Nuclear receptor 25 94

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc15420 Meloidogyne incognita Minc15420 I 0.995
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.994
L889_g29204 Steinernema feltiae L889_g29204 I 0.993
L898_g4801 Steinernema monticolum L898_g4801 I 0.993
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.993
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.993
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.993
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.993
L893_g6878 Steinernema glaseri L893_g6878 I 0.992
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.991
Bm12053 Brugia malayi Bm12053 I 0.991
Bm4894 Brugia malayi Bm4894 I 0.991
LOAG_05485 Loa loa LOAG_05485 I 0.991
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.991
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.991
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.991
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.991
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.991
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.991
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.991
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.991
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.991
NECAME_05125 Necator americanus NECAME_05125 I 0.991
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.991
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.991
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.991
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.991
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.991
CBG19604 Caenorhabditis briggsae CBG19604 I 0.989
CBN07936 Caenorhabditis brenneri CBN07936 I 0.989
CBN20828 Caenorhabditis brenneri CBN20828 I 0.989
CJA04720 Caenorhabditis japonica CJA04720 I 0.989
CRE06667 Caenorhabditis remanei CRE06667 I 0.989
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.989
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.989
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.989
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.989
PPA21285 Pristionchus pacificus PPA21285 I 0.986
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.986
CBN13729 Caenorhabditis brenneri CBN13729 I 0.944
CBG17744 Caenorhabditis briggsae CBG17744 I 0.938
CJA08328 Caenorhabditis japonica CJA08328 I 0.933
Bm2389 Brugia malayi Bm2389 I 0.932
CRE02711 Caenorhabditis remanei CRE02711 I 0.932
CRE10161 Caenorhabditis remanei CRE10161 I 0.932
LOAG_01074 Loa loa LOAG_01074 I 0.932
nhr-31 Caenorhabditis elegans WBGene00003625 I 0.932
ASU_04305 Ascaris suum ASU_04305 I 0.932
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I 0.932
Ppa-nhr-31 Pristionchus pacificus PPA24219 I 0.931
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I 0.931
L596_g3809 Steinernema carpocapsae L596_g3809 I 0.928
L889_g8621 Steinernema feltiae L889_g8621 I 0.928
L893_g27201 Steinernema glaseri L893_g27201 I 0.928
L898_g2799 Steinernema monticolum L898_g2799 I 0.928
DME_0000188101 Dracunculus medinensis DME_0000188101 I 0.927
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I 0.927
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.926
WBGene00241236 Onchocerca volvulus WBGene00241236 I 0.921
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I 0.920
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I 0.920
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I 0.920
HCOI01716000 Haemonchus contortus HCOI01716000 I 0.920
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I 0.920
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I 0.920
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I 0.920
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I 0.920
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I 0.919
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I 0.919
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I 0.919
augustus_masked-nMf.1.1.scaf06891-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06891-processed-gene-0.0 N 0.917
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I 0.914
SMUV_0000212501 Syphacia muris SMUV_0000212501 I 0.914
ANCCAN_09370 Ancylostoma caninum ANCCAN_09370 N 0.900
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I 0.894
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.893
GPLIN_001106000 Globodera pallida GPLIN_001106000 I 0.893
RSKR_0000868400 Rhabditophanes kr3021 RSKR_0000868400 N 0.888
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.886
CBG07552 Caenorhabditis briggsae CBG07552 I 0.885
CBN19233 Caenorhabditis brenneri CBN19233 I 0.885
CRE15289 Caenorhabditis remanei CRE15289 I 0.885
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.885
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.881
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.880
Bm14724 Brugia malayi Bm14724 I 0.880
LOAG_18352 Loa loa LOAG_18352 I 0.880
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.880
ASU_10946 Ascaris suum ASU_10946 I 0.880
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.880
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.880
L892_g650 Steinernema scapterisci L892_g650 I 0.880
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.880
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.880
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.880
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.880
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.880
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.879
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.879
NECAME_04545 Necator americanus NECAME_04545 I 0.879
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.879
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.879
L893_g29555 Steinernema glaseri L893_g29555 I 0.876
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.876
CJA13646 Caenorhabditis japonica CJA13646 I 0.875
PPA20304 Pristionchus pacificus PPA20304 I 0.867
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.864
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.864
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.864
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.864
nOo.2.0.1.g02048 Onchocerca ochengi nOo.2.0.1.g02048 N 0.854
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.846
Minc01725 Meloidogyne incognita Minc01725 I 0.844
Minc13525 Meloidogyne incognita Minc13525 I 0.844
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.844
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.844
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.844
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.832
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.832
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.823
HCOI00878400 Haemonchus contortus HCOI00878400 N 0.816
HCOI02063000 Haemonchus contortus HCOI02063000 N 0.816
HCOI02063200 Haemonchus contortus HCOI02063200 N 0.816
HCOI02063400 Haemonchus contortus HCOI02063400 N 0.816
HCOI02063800 Haemonchus contortus HCOI02063800 N 0.816
HCOI02064100 Haemonchus contortus HCOI02064100 N 0.816
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.812
L889_g8361 Steinernema feltiae L889_g8361 I 0.812
L898_g10316 Steinernema monticolum L898_g10316 I 0.812
CJA03362 Caenorhabditis japonica CJA03362 N 0.809
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.807
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.802
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.799
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.799
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.799
L889_g5777 Steinernema feltiae L889_g5777 I 0.799
L893_g29388 Steinernema glaseri L893_g29388 I 0.799
L898_g24498 Steinernema monticolum L898_g24498 I 0.799
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.798
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.792
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.792
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.792
CBG06052 Caenorhabditis briggsae CBG06052 I 0.782
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.782
nhr-97 Caenorhabditis elegans WBGene00003687 N 0.781
nRc.2.0.1.g00257 Romanomermis culicivorax nRc.2.0.1.g00257 I 0.779
CBG15006 Caenorhabditis briggsae CBG15006 I 0.776
CBN08571 Caenorhabditis brenneri CBN08571 I 0.776
CBN10811 Caenorhabditis brenneri CBN10811 I 0.776
CRE09911 Caenorhabditis remanei CRE09911 I 0.776
CRE14116 Caenorhabditis remanei CRE14116 I 0.776
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.776
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.776
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.775
CRE12779 Caenorhabditis remanei CRE12779 I 0.772
CBG19594 Caenorhabditis briggsae CBG19594 I 0.765
CBN31048 Caenorhabditis brenneri CBN31048 I 0.765
CRE06661 Caenorhabditis remanei CRE06661 I 0.765
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.764
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.764
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.764
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.764
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.764
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.764
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.764
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.764
NECAME_12696 Necator americanus NECAME_12696 I 0.764
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.764
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.764
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.764
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.763
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.763
CBN18797 Caenorhabditis brenneri CBN18797 I 0.762
CBN26258 Caenorhabditis brenneri CBN26258 I 0.762
BXY_0179600 Bursaphelenchus xylophilus BXY_0179600 I 0.761
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.756
SBAD_0000391501 Soboliphyme baturini SBAD_0000391501 I 0.755
CBG03844 Caenorhabditis briggsae CBG03844 I 0.745
CBN18198 Caenorhabditis brenneri CBN18198 I 0.745
CBN20749 Caenorhabditis brenneri CBN20749 I 0.745
CRE08259 Caenorhabditis remanei CRE08259 I 0.745
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.745
ASU_03870 Ascaris suum ASU_03870 I 0.745
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.745
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.745
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.745
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.745