GPLIN_001106000 (Globodera pallida)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 GPLIN_001106000 T308686_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.787 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_001106000 Nuclear receptor 187 256

Links

Other Nuclear receptor family TFs
Other Globodera pallida TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DME_0000188101 Dracunculus medinensis DME_0000188101 I 0.990
LOAG_01074 Loa loa LOAG_01074 I 0.989
Ppa-nhr-31 Pristionchus pacificus PPA24219 I 0.989
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I 0.989
CBG17744 Caenorhabditis briggsae CBG17744 I 0.989
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I 0.989
Bm2389 Brugia malayi Bm2389 I 0.989
ASU_04305 Ascaris suum ASU_04305 I 0.989
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I 0.988
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I 0.988
CRE10161 Caenorhabditis remanei CRE10161 I 0.988
nhr-31 Caenorhabditis elegans WBGene00003625 I 0.988
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I 0.988
L889_g8621 Steinernema feltiae L889_g8621 I 0.988
L596_g3809 Steinernema carpocapsae L596_g3809 I 0.988
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I 0.988
HCOI01716000 Haemonchus contortus HCOI01716000 I 0.988
L893_g27201 Steinernema glaseri L893_g27201 I 0.988
CJA08328 Caenorhabditis japonica CJA08328 I 0.988
L898_g2799 Steinernema monticolum L898_g2799 I 0.988
CRE02711 Caenorhabditis remanei CRE02711 I 0.988
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I 0.988
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I 0.988
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I 0.988
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I 0.987
SMUV_0000212501 Syphacia muris SMUV_0000212501 I 0.986
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I 0.986
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I 0.984
WBGene00241236 Onchocerca volvulus WBGene00241236 I 0.983
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I 0.970
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I 0.970
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I 0.970
CBN13729 Caenorhabditis brenneri CBN13729 I 0.965
nOo.2.0.1.g02048 Onchocerca ochengi nOo.2.0.1.g02048 N 0.959
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.933
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.933
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.933
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.922
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.922
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.922
NECAME_12696 Necator americanus NECAME_12696 I 0.922
CRE06661 Caenorhabditis remanei CRE06661 I 0.922
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.922
CBN31048 Caenorhabditis brenneri CBN31048 I 0.922
CBG19594 Caenorhabditis briggsae CBG19594 I 0.922
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.922
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.922
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.922
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.922
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.922
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.922
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.922
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.922
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.922
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.922
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.920
PPA21285 Pristionchus pacificus PPA21285 I 0.920
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.909
NECAME_05125 Necator americanus NECAME_05125 I 0.908
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.908
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.908
L898_g10316 Steinernema monticolum L898_g10316 I 0.908
L889_g8361 Steinernema feltiae L889_g8361 I 0.908
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.908
HCOI01268300 Haemonchus contortus HCOI01268300 I 0.908
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.908
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.908
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.908
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.906
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.906
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.906
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.906
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.905
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.905
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.905
Bm4894 Brugia malayi Bm4894 I 0.905
Bm12053 Brugia malayi Bm12053 I 0.905
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.905
LOAG_05485 Loa loa LOAG_05485 I 0.905
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.905
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.905
CJA04720 Caenorhabditis japonica CJA04720 I 0.905
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.905
CBG19604 Caenorhabditis briggsae CBG19604 I 0.905
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.905
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.905
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.905
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.905
L889_g29204 Steinernema feltiae L889_g29204 I 0.903
CBN20828 Caenorhabditis brenneri CBN20828 I 0.903
CRE06667 Caenorhabditis remanei CRE06667 I 0.903
L893_g6878 Steinernema glaseri L893_g6878 I 0.903
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.903
L898_g4801 Steinernema monticolum L898_g4801 I 0.903
CBN07936 Caenorhabditis brenneri CBN07936 I 0.903
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.903
RSKR_0000868400 Rhabditophanes kr3021 RSKR_0000868400 N 0.900
ANCDUO_09404 Ancylostoma duodenale ANCDUO_09404 N 0.897
maker-nMf.1.1.scaf03124-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf03124-snap-gene-0.5 N 0.896
Minc15420 Meloidogyne incognita Minc15420 I 0.893
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I 0.893
BTMF_0000225801 Brugia timori BTMF_0000225801 N 0.889
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I 0.878
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.864
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.864
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.864
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.864
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.857
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.857
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.857
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.856
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.848
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.847
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.840
CBN18797 Caenorhabditis brenneri CBN18797 I 0.839
CBN26258 Caenorhabditis brenneri CBN26258 I 0.839
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.828
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.820
L898_g24498 Steinernema monticolum L898_g24498 I 0.820
L893_g29388 Steinernema glaseri L893_g29388 I 0.820
L889_g5777 Steinernema feltiae L889_g5777 I 0.820
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.820
nAv.1.0.1.g09235 Acanthocheilonema viteae nAv.1.0.1.g09235 N 0.807
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.801
CBN25890 Caenorhabditis brenneri CBN25890 N 0.788
CBG06052 Caenorhabditis briggsae CBG06052 I 0.787
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.787
CRE12779 Caenorhabditis remanei CRE12779 I 0.784
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.772
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.769
ASU_01199 Ascaris suum ASU_01199 I 0.755
L893_g32432 Steinernema glaseri L893_g32432 I 0.745