CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN25890
(
Caenorhabditis brenneri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBN25890
T301841_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN25890
Nuclear receptor
34
91
DTCRVCGDGNAKTHYGVVTCFGCKGFFRRTLKRPSEYACRHNGNCVVDRHERNSCRFH
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis brenneri
TFs
79 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nhr-119
Caenorhabditis elegans
WBGene00003709
I
0.983
NBR_0001432001
Nippostrongylus brasiliensis
NBR_0001432001
I
0.983
DME_0000742401
Dracunculus medinensis
DME_0000742401
I
0.980
CBG19594
Caenorhabditis briggsae
CBG19594
I
0.979
CBN31048
Caenorhabditis brenneri
CBN31048
I
0.979
CRE06661
Caenorhabditis remanei
CRE06661
I
0.979
ACAC_0000239001
Angiostrongylus cantonensis
ACAC_0000239001
I
0.979
ACOC_0001326501
Angiostrongylus costaricensis
ACOC_0001326501
I
0.979
ANCCEY_03357
Ancylostoma ceylanicum
ANCCEY_03357
I
0.979
DICVIV_02348
Dictyocaulus viviparus
DICVIV_02348
I
0.979
HCOI00769300
Haemonchus contortus
HCOI00769300
I
0.979
HCOI01406200
Haemonchus contortus
HCOI01406200
I
0.979
HPBE_0001043101
Heligmosomoides bakeri
HPBE_0001043101
I
0.979
HPLM_0001680701
Haemonchus placei
HPLM_0001680701
I
0.979
NECAME_12696
Necator americanus
NECAME_12696
I
0.979
OESDEN_02652
Oesophagostomum dentatum
OESDEN_02652
I
0.979
TELCIR_05080
Teladorsagia circumcincta
TELCIR_05080
I
0.979
TELCIR_07363
Teladorsagia circumcincta
TELCIR_07363
I
0.979
Hba_14958
Heterorhabditis bacteriophora
Hba_14958
I
0.976
L596_g25297
Steinernema carpocapsae
L596_g25297
I
0.972
L889_g8361
Steinernema feltiae
L889_g8361
I
0.972
L898_g10316
Steinernema monticolum
L898_g10316
I
0.972
GPLIN_000268400
Globodera pallida
GPLIN_000268400
I
0.963
MhA1_Contig984.frz3.gene20
Meloidogyne hapla
MhA1_Contig984.frz3.gene20
I
0.963
BXY_1600300
Bursaphelenchus xylophilus
BXY_1600300
I
0.955
ASIM_0001309901
Anisakis simplex
ASIM_0001309901
I
0.949
PTRK_0000510500
Parastrongyloides trichosuri
PTRK_0000510500
I
0.935
SPAL_0001436300
Strongyloides papillosus
SPAL_0001436300
I
0.935
SSTP_0000831700
Strongyloides stercoralis
SSTP_0000831700
I
0.935
SVE_0301400
Strongyloides venezuelensis
SVE_0301400
I
0.935
genemark-nMf.1.1.scaf00140-processed-gene-0.6
Meloidogyne floridensis
genemark-nMf.1.1.scaf00140-processed-gene-0.6
I
0.902
ANCDUO_24681
Ancylostoma duodenale
ANCDUO_24681
N
0.881
ASU_09451
Ascaris suum
ASU_09451
N
0.871
EVEC_0000733201
Enterobius vermicularis
EVEC_0000733201
N
0.864
CBG17744
Caenorhabditis briggsae
CBG17744
I
0.862
EVEC_0001115901
Enterobius vermicularis
EVEC_0001115901
I
0.858
SMUV_0000212501
Syphacia muris
SMUV_0000212501
I
0.858
L596_g3809
Steinernema carpocapsae
L596_g3809
I
0.853
L889_g8621
Steinernema feltiae
L889_g8621
I
0.853
L893_g27201
Steinernema glaseri
L893_g27201
I
0.853
L898_g2799
Steinernema monticolum
L898_g2799
I
0.853
Bm2389
Brugia malayi
Bm2389
I
0.836
LOAG_01074
Loa loa
LOAG_01074
I
0.836
ASU_04305
Ascaris suum
ASU_04305
I
0.836
Hba_06510
Heterorhabditis bacteriophora
Hba_06510
I
0.836
Ppa-nhr-31
Pristionchus pacificus
PPA24219
I
0.832
scaffold601-EXSNAP2012.19
Pristionchus exspectatus
scaffold601-EXSNAP2012.19
I
0.832
CJA08328
Caenorhabditis japonica
CJA08328
I
0.830
L893_g32432
Steinernema glaseri
L893_g32432
I
0.830
DME_0000188101
Dracunculus medinensis
DME_0000188101
I
0.829
CRE02711
Caenorhabditis remanei
CRE02711
I
0.827
CRE10161
Caenorhabditis remanei
CRE10161
I
0.827
nhr-31
Caenorhabditis elegans
WBGene00003625
I
0.827
ANCCAN_03474
Ancylostoma caninum
ANCCAN_03474
I
0.827
DICVIV_10822
Dictyocaulus viviparus
DICVIV_10822
I
0.827
HCOI01716000
Haemonchus contortus
HCOI01716000
I
0.827
HPLM_0001092501
Haemonchus placei
HPLM_0001092501
I
0.827
NBR_0001013001
Nippostrongylus brasiliensis
NBR_0001013001
I
0.827
OESDEN_12257
Oesophagostomum dentatum
OESDEN_12257
I
0.827
PTRK_0000207700
Parastrongyloides trichosuri
PTRK_0000207700
I
0.827
nDi.2.2.2.g03563
Dirofilaria immitis
nDi.2.2.2.g03563
I
0.826
BXY_0740100
Bursaphelenchus xylophilus
BXY_0740100
I
0.821
RSKR_0000868400
Rhabditophanes kr3021
RSKR_0000868400
N
0.819
ASU_01199
Ascaris suum
ASU_01199
I
0.807
SPAL_0000110800
Strongyloides papillosus
SPAL_0000110800
I
0.804
SSTP_0001234400
Strongyloides stercoralis
SSTP_0001234400
I
0.804
SVE_0137800
Strongyloides venezuelensis
SVE_0137800
I
0.804
PEQ_0000633601
Parascaris equorum
PEQ_0000633601
I
0.793
SMUV_0000859101
Syphacia muris
SMUV_0000859101
I
0.793
WBGene00241236
Onchocerca volvulus
WBGene00241236
I
0.788
GPLIN_001106000
Globodera pallida
GPLIN_001106000
I
0.788
RSKR_0000832300
Rhabditophanes kr3021
RSKR_0000832300
I
0.780
L889_g5777
Steinernema feltiae
L889_g5777
I
0.763
BXY_0008800
Bursaphelenchus xylophilus
BXY_0008800
I
0.756
L596_g20569
Steinernema carpocapsae
L596_g20569
I
0.756
L893_g29388
Steinernema glaseri
L893_g29388
I
0.756
L898_g24498
Steinernema monticolum
L898_g24498
I
0.756
nOo.2.0.1.g02048
Onchocerca ochengi
nOo.2.0.1.g02048
N
0.752
ASIM_0001301101
Anisakis simplex
ASIM_0001301101
I
0.751