CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG01439
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG01439
T301441_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG01439
Nuclear receptor
14
83
HVCLVCQDFAAGYHYGVPSCVGCKTFFRRTIMKKQKYICQYEGNCPVDKTIRCACRYCRFEKCLNVGMDR
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nhr-114
Caenorhabditis elegans
WBGene00003704
N
0.986
CBN03435
Caenorhabditis brenneri
CBN03435
N
0.985
CBN19580
Caenorhabditis brenneri
CBN19580
N
0.985
CRE09267
Caenorhabditis remanei
CRE09267
I
0.985
CRE26982
Caenorhabditis remanei
CRE26982
I
0.895
CBG23318
Caenorhabditis briggsae
CBG23318
I
0.892
nhr-68
Caenorhabditis elegans
WBGene00003658
I
0.892
CBN30215
Caenorhabditis brenneri
CBN30215
I
0.865
PTRK_0001312000
Parastrongyloides trichosuri
PTRK_0001312000
I
0.819
ANCCAN_14103
Ancylostoma caninum
ANCCAN_14103
I
0.816
ANCCAN_17081
Ancylostoma caninum
ANCCAN_17081
I
0.816
ALUE_0002179401
Ascaris lumbricoides
ALUE_0002179401
I
0.813
ASU_12501
Ascaris suum
ASU_12501
I
0.813
NECAME_00872
Necator americanus
NECAME_00872
I
0.813
SPAL_0000490500
Strongyloides papillosus
SPAL_0000490500
I
0.813
SVE_1951500
Strongyloides venezuelensis
SVE_1951500
I
0.813
L596_g23777
Steinernema carpocapsae
L596_g23777
I
0.809
L893_g25227
Steinernema glaseri
L893_g25227
I
0.809
HCOI00601000
Haemonchus contortus
HCOI00601000
I
0.799
HPLM_0000564201
Haemonchus placei
HPLM_0000564201
I
0.799
CRE26981
Caenorhabditis remanei
CRE26981
I
0.795
CBG23319
Caenorhabditis briggsae
CBG23319
I
0.793
SSTP_0000546600
Strongyloides stercoralis
SSTP_0000546600
I
0.787
nhr-101
Caenorhabditis elegans
WBGene00003691
I
0.779
nhr-10
Caenorhabditis elegans
WBGene00003609
I
0.773
PPA21285
Pristionchus pacificus
PPA21285
I
0.772
scaffold51-EXSNAP2012.23
Pristionchus exspectatus
scaffold51-EXSNAP2012.23
I
0.772
RSKR_0000868400
Rhabditophanes kr3021
RSKR_0000868400
N
0.771
CRE25378
Caenorhabditis remanei
CRE25378
I
0.759
CBG19604
Caenorhabditis briggsae
CBG19604
I
0.757
CJA04720
Caenorhabditis japonica
CJA04720
I
0.757
HCOI01268300
Haemonchus contortus
HCOI01268300
I
0.757
NBR_0000170601
Nippostrongylus brasiliensis
NBR_0000170601
I
0.757
CBG16594
Caenorhabditis briggsae
CBG16594
I
0.756
CBN20518
Caenorhabditis brenneri
CBN20518
I
0.756
RSKR_0000625800
Rhabditophanes kr3021
RSKR_0000625800
I
0.754
CBN07936
Caenorhabditis brenneri
CBN07936
I
0.753
CBN20828
Caenorhabditis brenneri
CBN20828
I
0.753
CRE06667
Caenorhabditis remanei
CRE06667
I
0.753
nhr-88
Caenorhabditis elegans
WBGene00003678
I
0.753
L893_g6878
Steinernema glaseri
L893_g6878
I
0.753