RSKR_0000625800 (Rhabditophanes kr3021)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 RSKR_0000625800 T310108_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.920 0.687
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.751 0.597
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000625800.1 Nuclear receptor 21 87

Links

Other Nuclear receptor family TFs
Other Rhabditophanes kr3021 TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.957
L893_g25227 Steinernema glaseri L893_g25227 I 0.957
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.957
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.957
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.956
ASU_12501 Ascaris suum ASU_12501 I 0.956
NECAME_00872 Necator americanus NECAME_00872 I 0.956
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.953
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.952
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.952
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.952
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.952
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.950
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.946
CBG16594 Caenorhabditis briggsae CBG16594 I 0.940
CBN20518 Caenorhabditis brenneri CBN20518 I 0.940
CRE25378 Caenorhabditis remanei CRE25378 I 0.935
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.935
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.934
CBG01866 Caenorhabditis briggsae CBG01866 I 0.920
CBN19235 Caenorhabditis brenneri CBN19235 I 0.920
CJA13458 Caenorhabditis japonica CJA13458 I 0.920
CRE03310 Caenorhabditis remanei CRE03310 I 0.920
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.920
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.920
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.920
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.920
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.918
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.917
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.917
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.917
L889_g7780 Steinernema feltiae L889_g7780 I 0.917
L892_g8671 Steinernema scapterisci L892_g8671 I 0.917
L898_g22454 Steinernema monticolum L898_g22454 I 0.917
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.911
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.910
Bm5319 Brugia malayi Bm5319 I 0.904
LOAG_00300 Loa loa LOAG_00300 I 0.904
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.904
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.904
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.904
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.904
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.904
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.898
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.897
L889_g29879 Steinernema feltiae L889_g29879 I 0.897
L893_g3010 Steinernema glaseri L893_g3010 I 0.897
L898_g2764 Steinernema monticolum L898_g2764 I 0.897
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.877
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.863
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.855
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.855
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.855
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.854
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.848
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.843
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.835
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.835
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.835
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.835
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.825
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.820
ASU_10584 Ascaris suum ASU_10584 I 0.819
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.819
L889_g22901 Steinernema feltiae L889_g22901 I 0.819
L892_g5079 Steinernema scapterisci L892_g5079 I 0.819
L893_g15276 Steinernema glaseri L893_g15276 I 0.819
L898_g8573 Steinernema monticolum L898_g8573 I 0.819
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.818
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.817
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.817
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.817
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.814
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.800
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.800
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.793
CBG23319 Caenorhabditis briggsae CBG23319 I 0.792
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.783
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.783
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.781
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.776
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.776
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.770
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.765
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.765
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.760
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.760
CRE09267 Caenorhabditis remanei CRE09267 I 0.757
CBG01439 Caenorhabditis briggsae CBG01439 N 0.754
CBG03844 Caenorhabditis briggsae CBG03844 I 0.751
CBN18198 Caenorhabditis brenneri CBN18198 I 0.751
CBN20749 Caenorhabditis brenneri CBN20749 I 0.751
CRE08259 Caenorhabditis remanei CRE08259 I 0.751
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.751
ASU_03870 Ascaris suum ASU_03870 I 0.751
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.751
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.751
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.751
LOAG_08615 Loa loa LOAG_08615 I 0.749
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.749
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.749
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.748
nhr-114 Caenorhabditis elegans WBGene00003704 N 0.745