L898_g20180 (Steinernema monticolum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L898_g20180 T309457_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.809 0.552
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g20180.t1 Nuclear receptor 15 82

Links

Other Nuclear receptor family TFs
Other Steinernema monticolum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.809
CBN28290 Caenorhabditis brenneri CBN28290 I 0.802
L898_g4012 Steinernema monticolum L898_g4012 I 0.768
L898_g19021 Steinernema monticolum L898_g19021 I 0.807
L898_g19019 Steinernema monticolum L898_g19019 I 0.831
L898_g19014 Steinernema monticolum L898_g19014 I 0.857
L898_g12799 Steinernema monticolum L898_g12799 I 0.746
L893_g18993 Steinernema glaseri L893_g18993 I 0.799
L892_g14825 Steinernema scapterisci L892_g14825 I 0.833
L892_g14818 Steinernema scapterisci L892_g14818 I 0.812
L892_g14817 Steinernema scapterisci L892_g14817 I 0.835
L892_g10842 Steinernema scapterisci L892_g10842 I 0.816
L889_g8187 Steinernema feltiae L889_g8187 I 0.795
CBN21486 Caenorhabditis brenneri CBN21486 I 0.802
L596_g14533 Steinernema carpocapsae L596_g14533 I 0.816
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.919
L596_g14537 Steinernema carpocapsae L596_g14537 I 0.867
L889_g6792 Steinernema feltiae L889_g6792 I 0.837
L889_g6797 Steinernema feltiae L889_g6797 I 0.783
L889_g6798 Steinernema feltiae L889_g6798 I 0.795
L892_g14824 Steinernema scapterisci L892_g14824 N 0.780
L596_g14541 Steinernema carpocapsae L596_g14541 N 0.805
L889_g6806 Steinernema feltiae L889_g6806 N 0.798
L892_g14814 Steinernema scapterisci L892_g14814 N 0.755
L898_g2943 Steinernema monticolum L898_g2943 N 0.817
L898_g2944 Steinernema monticolum L898_g2944 N 0.852
L898_g32142 Steinernema monticolum L898_g32142 N 0.968
L898_g32516 Steinernema monticolum L898_g32516 N 0.791
L892_g10840 Steinernema scapterisci L892_g10840 N 0.769
L898_g4018 Steinernema monticolum L898_g4018 N 0.822