CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NECAME_01500
(
Necator americanus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
NECAME_01500
T309784_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-86
M02415_2.00
Caenorhabditis elegans
KTGTAGTC
GACTACAM
PBM
Weirauch et al.(2014)
pTH8598
0.822
0.529
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NECAME_01500
Nuclear receptor
6
76
RCCRVCCDRSDGAHFGIDSCRACAAFFRRSIAMKKKYICRQGSNTCDISKSVRCICRKCRLEKCLLAGMLP
Links
Other
Nuclear receptor
family TFs
Other
Necator americanus
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_00980
Verticillium albo atrum
VDBG_00980
N
CGGC5_8678
Colletotrichum gloeosporioides
CGGC5_8678
N
CH063_06245
Colletotrichum higginsianum
CH063_06245
N
Cob_10402
Colletotrichum orbiculare
Cob_10402
N
CSUB01_02534
Colletotrichum sublineola
CSUB01_02534
N
GLRG_06073
Colletotrichum graminicola
GLRG_06073
N
NEUTE1DRAFT_80293
Neurospora tetrasperma
NEUTE1DRAFT_80293
N
PODANS_1_22920
Podospora anserina
PODANS_1_22920
N
VDAG_00592
Verticillium dahliae
VDAG_00592
N
fsd-1
Neurospora crassa
NCU09915
N