CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000007934
(
Pongo abelii
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSPPYG00000007934
T311129_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TP53
M09337_2.00
Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH
Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A
0.995
0.995
TP53
M09621_2.00
Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN
Misc
Heinz et al.(2010)
Saos-p53
0.995
0.995
TP53
M11197_2.00
Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY
Transfac
Matys et al.(2006)
V$P53_01
0.995
0.995
TP53
M11198_2.00
Homo sapiens
NGRCWTGYYY
RRRCAWGYCN
Transfac
Matys et al.(2006)
V$P53_02
0.995
0.995
TP53
M11199_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_03
0.995
0.995
TP53
M11200_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_04
0.995
0.995
TP53
M11201_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_05
0.995
0.995
TP53
M11202_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3_01
0.995
0.995
TP53
M11203_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3
0.995
0.995
Trp53
M03439_2.00
Mus musculus
ACWTGYYNHHDSACWTGT
ACAWGTSHDDNRRCAWGT
SELEX
Jolma et al.(2013)
Tp53_1
0.887
0.887
Trp53
M03440_2.00
Mus musculus
ACWTGTYHNNGACWTGT
ACAWGTCNNDRACAWGT
SELEX
Jolma et al.(2013)
Tp53_2
0.887
0.887
Trp53
M03441_2.00
Mus musculus
RACATGYCYRGRCATGTY
RACATGYCYRGRCATGTY
SELEX
Jolma et al.(2013)
Tp53_3
0.887
0.887
Trp53
M09340_2.00
Mus musculus
RRRCAWGYCCRGRCADGYMH
DKRCHTGYCYGGRCWTGYYY
Misc
Kulakovskiy et al.(2013)
P53_MOUSE.H11MO.0.A
0.887
0.887
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000008923
p53
95
289
SSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENF
Links
Other
p53
family TFs
Other
Pongo abelii
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
hlh-11
Caenorhabditis elegans
WBGene00001955
D
crp
Drosophila melanogaster
FBgn0001994
D
DICVIV_02775
Dictyocaulus viviparus
DICVIV_02775
I
KGM_15765
Danaus plexippus
KGM_15765
I
L798_07621
Zootermopsis nevadensis
L798_07621
I
PPA14541
Pristionchus pacificus
PPA14541
I
LLOJ009485
Lutzomyia longipalpis
LLOJ009485
I
ACAC_0001093601
Angiostrongylus cantonensis
ACAC_0001093601
I
ACOC_0000846801
Angiostrongylus costaricensis
ACOC_0000846801
I
ANCCAN_04319
Ancylostoma caninum
ANCCAN_04319
I
ANCCEY_00577
Ancylostoma ceylanicum
ANCCEY_00577
I
CGOC_0000858101
Cylicostephanus goldi
CGOC_0000858101
I
AGAP010201
Anopheles gambiae
AGAP010201
I
HCOI01121900
Haemonchus contortus
HCOI01121900
I
HPBE_0002474001
Heligmosomoides bakeri
HPBE_0002474001
I
NBR_0000263101
Nippostrongylus brasiliensis
NBR_0000263101
I
NBR_0000299801
Nippostrongylus brasiliensis
NBR_0000299801
I
NECAME_04511
Necator americanus
NECAME_04511
I
scaffold60-EXSNAP2012.12
Pristionchus exspectatus
scaffold60-EXSNAP2012.12
I
SVUK_0000451101
Strongylus vulgaris
SVUK_0000451101
I
TELCIR_07248
Teladorsagia circumcincta
TELCIR_07248
I
TELCIR_11314
Teladorsagia circumcincta
TELCIR_11314
I
GG24179
Drosophila erecta
FBgn0116312
I
ACYPI003006
Acyrthosiphon pisum
ACYPI003006
I
BGIBMGA010353
Bombyx mori
BGIBMGA010353
I
CBG10034
Caenorhabditis briggsae
CBG10034
I
CBN22234
Caenorhabditis brenneri
CBN22234
I
CJA09019
Caenorhabditis japonica
CJA09019
I
CRE25281
Caenorhabditis remanei
CRE25281
I
GA20511
Drosophila pseudoobscura
FBgn0080505
I
GF21721
Drosophila ananassae
FBgn0098721
I
HMEL008759
Heliconius melpomene
HMEL008759
I
GH10096
Drosophila grimshawi
FBgn0117577
I
GJ16254
Drosophila virilis
FBgn0203439
I
GB48999
Apis mellifera
GB48999
I
GE19372
Drosophila yakuba
FBgn0236717
I
GK24289
Drosophila willistoni
FBgn0226250
I
GD21926
Drosophila simulans
FBgn0193342
I
GM17917
Drosophila sechellia
FBgn0172824
I
GL14101
Drosophila persimilis
FBgn0151706
I
GI14377
Drosophila mojavensis
FBgn0137129
I
EEL_0000428401
Elaeophora elaphi
EEL_0000428401
N
GPUH_0001027101
Gongylonema pulchrum
GPUH_0001027101
N
nAv.1.0.1.g08834
Acanthocheilonema viteae
nAv.1.0.1.g08834
N
ANCDUO_12144
Ancylostoma duodenale
ANCDUO_12144
N
WBGene00244598
Onchocerca volvulus
WBGene00244598
N
nDi.2.2.2.g07826
Dirofilaria immitis
nDi.2.2.2.g07826
N
BTMF_0001307601
Brugia timori
BTMF_0001307601
N
nLs.2.1.2.g06012
Litomosoides sigmodontis
nLs.2.1.2.g06012
N
nOo.2.0.1.g02551
Onchocerca ochengi
nOo.2.0.1.g02551
N
ASU_09033
Ascaris suum
ASU_09033
N
Bm4538
Brugia malayi
Bm4538
N
TCNE_0001886101
Toxocara canis
TCNE_0001886101
N
LOAG_07256
Loa loa
LOAG_07256
N
ASIM_0001377801
Anisakis simplex
ASIM_0001377801
N