SCUD_0000788801 (Schistosoma curassoni)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 SCUD_0000788801 T312911_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX7
M00346_2.00 		Homo sapiens
NGTYAYGSHN
NDSCRTRACN		 PBM
Barrera et al.(2016)
PAX7_REF 		0.738 0.738
PAX7
M00345_2.00 		Homo sapiens
NSGTCACGSN
NSCGTGACSN		 PBM
Barrera et al.(2016)
PAX7_P112L 		0.738 0.738
sv
M01302_2.00 		Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN		 PBM
Lambert et al.(2019)
pTH9773 		0.708 0.708
PAX1
M03442_2.00 		Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH		 SELEX
Jolma et al.(2013)
PAX1_1 		0.708 0.708
PAX9
M03444_2.00 		Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN		 SELEX
Jolma et al.(2013)
PAX9_1 		0.708 0.708
Poxm
M03944_2.00 		Drosophila melanogaster
CAVTCAWGCGTGACR
YGTCACGCWTGABTG		 SELEX
Nitta et al.(2015)
Poxm_1 		0.708 0.708
Poxm
M03945_2.00 		Drosophila melanogaster
NYSAWGCRTRACS
SGTYAYGCWTSRN		 SELEX
Nitta et al.(2015)
Poxm_2 		0.708 0.708
sv
M03949_2.00 		Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN		 SELEX
Nitta et al.(2015)
sv_1 		0.708 0.708
PAX1
M05687_2.00 		Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX 		0.708 0.708
PAX9
M05689_2.00 		Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV		 SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX 		0.708 0.708
Poxm
M06436_2.00 		Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA
TCAYGSNYNDNBKNNNNNN		 B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129 		0.708 0.708
sv
M06438_2.00 		Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY		 B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561 		0.708 0.708
PAX1
M11207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX1_B 		0.708 0.708
pax9
M11204_2.00 		Danio rerio Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX9_B 		0.708 0.708
PAX1
M05688_2.00 		Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX 		0.708 0.708
PAX9
M05690_2.00 		Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV		 SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SCUD_0000788801-mRNA-1 Paired box 364 428

Links

Other Paired box family TFs
Other Schistosoma curassoni TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OIDMADRAFT_117559 Oidiodendron maius OIDMADRAFT_117559 N
estExt_fgenesh1_pg.C_sca_85_chr13_3_00015 Nectria haematococca estExt_fgenesh1_pg.C_sca_85_chr13_3_00015 N
Z519_11167 Cladophialophora bantiana Z519_11167 N
Z518_02371 Rhinocladiella mackenziei Z518_02371 N
Z517_05394 Fonsecaea pedrosoi Z517_05394 N
Z517_04340 Fonsecaea pedrosoi Z517_04340 N
SAPIO_CDS0007 Scedosporium apiospermum SAPIO_CDS0007 N
PV10_03377 Exophiala mesophila PV10_03377 N
PV07_01698 Cladophialophora immunda PV07_01698 N
PV05_11665 Exophiala xenobiotica PV05_11665 N
PV04_08970 Capronia semiimmersa PV04_08970 N
PV04_02591 Capronia semiimmersa PV04_02591 N
A1O1_07238 Capronia coronata A1O1_07238 N
NechaG102190 Fusarium solani NechaG102190 N
HMPREF1120_07748 Exophiala dermatitidis HMPREF1120_07748 N
HMPREF1120_05306 Exophiala dermatitidis HMPREF1120_05306 N
G647_08938 Cladophialophora carrionii G647_08938 N
FVEG_10827 Fusarium verticillioides FVEG_10827 N
A1O9_07253 Exophiala aquamarina A1O9_07253 N
A1O7_02428 Cladophialophora yegresii A1O7_02428 N
A1O5_05682 Cladophialophora psammophila A1O5_05682 N
A1O3_09130 Capronia epimyces A1O3_09130 N
A1O3_04485 Capronia epimyces A1O3_04485 N