SCUD_0000788801 (Schistosoma curassoni)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 SCUD_0000788801 T312911_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX7
M00346_2.00 		Homo sapiens
NGTYAYGSHN
NDSCRTRACN		 PBM
Barrera et al.(2016)
PAX7_REF 		0.738 0.738
PAX7
M00345_2.00 		Homo sapiens
NSGTCACGSN
NSCGTGACSN		 PBM
Barrera et al.(2016)
PAX7_P112L 		0.738 0.738
sv
M01302_2.00 		Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN		 PBM
Lambert et al.(2019)
pTH9773 		0.708 0.708
PAX1
M03442_2.00 		Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH		 SELEX
Jolma et al.(2013)
PAX1_1 		0.708 0.708
PAX9
M03444_2.00 		Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN		 SELEX
Jolma et al.(2013)
PAX9_1 		0.708 0.708
Poxm
M03944_2.00 		Drosophila melanogaster
CAVTCAWGCGTGACR
YGTCACGCWTGABTG		 SELEX
Nitta et al.(2015)
Poxm_1 		0.708 0.708
Poxm
M03945_2.00 		Drosophila melanogaster
NYSAWGCRTRACS
SGTYAYGCWTSRN		 SELEX
Nitta et al.(2015)
Poxm_2 		0.708 0.708
sv
M03949_2.00 		Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN		 SELEX
Nitta et al.(2015)
sv_1 		0.708 0.708
PAX1
M05687_2.00 		Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX 		0.708 0.708
PAX9
M05689_2.00 		Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV		 SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX 		0.708 0.708
Poxm
M06436_2.00 		Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA
TCAYGSNYNDNBKNNNNNN		 B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129 		0.708 0.708
sv
M06438_2.00 		Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY		 B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561 		0.708 0.708
PAX1
M11207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX1_B 		0.708 0.708
pax9
M11204_2.00 		Danio rerio Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX9_B 		0.708 0.708
PAX1
M05688_2.00 		Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV		 SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX 		0.708 0.708
PAX9
M05690_2.00 		Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV		 SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SCUD_0000788801-mRNA-1 Paired box 364 428

Links

Other Paired box family TFs
Other Schistosoma curassoni TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMTD_0001918101 Schistosoma mattheei SMTD_0001918101 I 0.968
SROB_0000822501 Schistosoma rodhaini SROB_0000822501 I 0.968
HDID_0000423901 Hymenolepis diminuta HDID_0000423901 N 0.800
CLEC006621 Cimex lectularius CLEC006621 I 0.750
PEQ_0000701201 Parascaris equorum PEQ_0000701201 I 0.750
PAX7 Homo sapiens ENSG00000009709 D 0.738
Pax7 Dipodomys ordii ENSDORG00000011854 I 0.738
ENSMODG00000025571 Monodelphis domestica ENSMODG00000025571 I 0.738
PAX7 Procavia capensis ENSPCAG00000005303 I 0.738
Alligator_sinensis_CCG006492.1 Alligator sinensis Alligator_sinensis_CCG006492.1 I 0.738
AFUN002668 Anopheles funestus AFUN002668 I 0.738
SPER_0002864701 Spirometra erinaceieuropaei SPER_0002864701 N 0.735
SBAD_0001213701 Soboliphyme baturini SBAD_0001213701 I 0.732
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.727
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.727
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.727
KGM_02686 Danaus plexippus KGM_02686 I 0.726
AGAP000057 Anopheles gambiae AGAP000057 I 0.723
ACHR009800 Anopheles christyi ACHR009800 I 0.723
ACUA027429 Anopheles culicifacies ACUA027429 I 0.723
AFUN011579 Anopheles funestus AFUN011579 I 0.723
AMEC016969 Anopheles melas AMEC016969 I 0.723
AMEM003247 Anopheles merus AMEM003247 I 0.723
AMIN002123 Anopheles minimus AMIN002123 I 0.723
ENSAMXG00000002161 Astyanax mexicanus ENSAMXG00000002161 I 0.708
pax1a Gasterosteus aculeatus ENSGACG00000006987 I 0.708
pax9 Gasterosteus aculeatus ENSGACG00000011298 I 0.708
ENSGMOG00000009128 Gadus morhua ENSGMOG00000009128 I 0.708
ENSLOCG00000013992 Lepisosteus oculatus ENSLOCG00000013992 I 0.708
ENSONIG00000000990 Oreochromis niloticus ENSONIG00000000990 I 0.708
ENSONIG00000008137 Oreochromis niloticus ENSONIG00000008137 I 0.708
pax1 Oryzias latipes ENSORLG00000017412 I 0.708
ENSPFOG00000017550 Poecilia formosa ENSPFOG00000017550 I 0.708
pax1a Tetraodon nigroviridis ENSTNIG00000016891 I 0.708
pax9 Tetraodon nigroviridis ENSTNIG00000019284 I 0.708
pax1a Takifugu rubripes ENSTRUG00000008079 I 0.708
pax9 Takifugu rubripes ENSTRUG00000011965 I 0.708
ENSXMAG00000015762 Xiphophorus maculatus ENSXMAG00000015762 I 0.708
GH23966 Drosophila grimshawi FBgn0131423 I 0.708
GI14046 Drosophila mojavensis FBgn0136800 I 0.708
GL18401 Drosophila persimilis FBgn0156002 I 0.708
GM13025 Drosophila sechellia FBgn0167956 I 0.708
GJ13730 Drosophila virilis FBgn0200951 I 0.708
GK13586 Drosophila willistoni FBgn0215594 I 0.708
spa-sv Drosophila pseudoobscura FBgn0249275 I 0.708
MESCA003563 Megaselia scalaris MESCA003563 I 0.708
WBGene00247363 Onchocerca volvulus WBGene00247363 N 0.708
Gfo_R012945 Geospiza fortis Gfo_R012945 I 0.708
estExt_fgenesh2_pg.C_420056 Branchiostoma floridae estExt_fgenesh2_pg.C_420056 I 0.708
pax1 Xenopus tropicalis XB-GENE-487951 I 0.708
ADIR000964 Anopheles dirus ADIR000964 I 0.708
MDOA001030 Musca domestica MDOA001030 I 0.708
nOo.2.0.1.g04237 Onchocerca ochengi nOo.2.0.1.g04237 N 0.708
ENSTNIG00000013141 Tetraodon nigroviridis ENSTNIG00000013141 I 0.702